Phocoena phocoena (harbor porpoise): 136132427
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Entry
136132427 CDS
T11058
Symbol
SMAD4
Name
(RefSeq) mothers against decapentaplegic homolog 4
KO
K04501
mothers against decapentaplegic homolog 4
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04068
FoxO signaling pathway
pphc04081
Hormone signaling
pphc04110
Cell cycle
pphc04310
Wnt signaling pathway
pphc04350
TGF-beta signaling pathway
pphc04371
Apelin signaling pathway
pphc04390
Hippo signaling pathway
pphc04520
Adherens junction
pphc04550
Signaling pathways regulating pluripotency of stem cells
pphc04659
Th17 cell differentiation
pphc04933
AGE-RAGE signaling pathway in diabetic complications
pphc05161
Hepatitis B
pphc05166
Human T-cell leukemia virus 1 infection
pphc05200
Pathways in cancer
pphc05210
Colorectal cancer
pphc05212
Pancreatic cancer
pphc05220
Chronic myeloid leukemia
pphc05225
Hepatocellular carcinoma
pphc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136132427 (SMAD4)
04350 TGF-beta signaling pathway
136132427 (SMAD4)
04390 Hippo signaling pathway
136132427 (SMAD4)
04371 Apelin signaling pathway
136132427 (SMAD4)
04068 FoxO signaling pathway
136132427 (SMAD4)
09133 Signaling molecules and interaction
04081 Hormone signaling
136132427 (SMAD4)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136132427 (SMAD4)
09144 Cellular community - eukaryotes
04520 Adherens junction
136132427 (SMAD4)
04550 Signaling pathways regulating pluripotency of stem cells
136132427 (SMAD4)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
136132427 (SMAD4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136132427 (SMAD4)
09162 Cancer: specific types
05210 Colorectal cancer
136132427 (SMAD4)
05212 Pancreatic cancer
136132427 (SMAD4)
05225 Hepatocellular carcinoma
136132427 (SMAD4)
05226 Gastric cancer
136132427 (SMAD4)
05220 Chronic myeloid leukemia
136132427 (SMAD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
136132427 (SMAD4)
05161 Hepatitis B
136132427 (SMAD4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
136132427 (SMAD4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
136132427
NCBI-ProteinID:
XP_065745335
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Position
13:complement(23123727..23160827)
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AA seq
553 aa
AA seq
DB search
MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITA
ITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFD
LKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPPSMLVKDEYVHDFEGQPSLSTEGHSIQ
TIQHPPSNRASTETYSTPALLAPSESNATSTTNFPNIPVASTSQPASILAGSHSEGLLQI
ASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGH
YWPPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPVVTVDGYVDPSGG
DRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG
RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIA
PAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEV
LHTMPIADPQPLD
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatgtctattacgaatacaccaacaagtaatgatgcctgtctgagcattgta
catagtttgatgtgccatagacaaggtggagagagtgaaacatttgcaaaaagagcaatt
gaaagtttggtaaagaaactgaaggagaaaaaagatgaattggattctttaataacagct
ataactacaaatggagctcaccctagcaaatgtgttaccatacagagaacattggatgga
aggcttcaggtggctggtcggaaaggatttcctcatgtgatctatgcccgtctctggagg
tggcctgatcttcacaaaaacgaattaaaacatgttaaatattgtcagtatgcatttgat
ttaaaatgtgatagtgtctgtgtgaatccatatcactatgaacgagttgtatcacctgga
attgatctctcaggattaacactgcagagtaatgctccacctagtatgttggtgaaggat
gaatatgttcatgactttgagggacagccatcattatccactgaagggcattcaattcaa
accatccagcatccaccaagtaatcgtgcatcgacggagacctacagcaccccagctctc
ttagccccatctgagtctaacgctaccagcaccaccaactttcccaacattcctgtggct
tccacaagtcagcctgccagtatactggcaggcagccatagtgaaggattgttgcagata
gcttcagggcctcagccaggacagcagcagaatggatttactggtcagccagctacttac
catcataacagcactaccacctggactggaagtagaactgcaccatacacacctaatttg
cctcaccatcaaaacggccatcttcagcaccacccgcctatgccgccccatcccggacat
tactggccgccagttcacaatgagcttgcattccagcctcccatttctaaccatcctgct
cctgagtattggtgttccattgcttactttgaaatggatgttcaagtaggagagacgttt
aaggttccttcaagctgtcctgttgttactgttgatggttatgtagacccttctggagga
gatcgcttttgcttgggtcaactctccaatgtccacaggacagaagccattgagagagca
aggttgcacataggcaaaggtgtgcagttggaatgtaaaggtgaaggtgatgtttgggtc
aggtgccttagtgaccatgcagtctttgtacagagctactacttagacagagaagctggg
cgtgcacctggagacgctgttcataagatctacccaagtgcatatataaaggtctttgat
ttgcgtcagtgtcatcgtcagatgcaacaacaggcagctactgcacaagctgcagcagct
gcccaggcagcagccgtggcaggaaacatccctggccccggatcagtaggtggaatagcc
ccagctatcagtttgtcagctgctgctggaatcggtgttgatgaccttcgtcgtttatgc
atactcaggatgagttttgtgaaaggctgggggcctgattacccaagacagagcatcaag
gaaacaccttgctggattgagattcacttacaccgggccctccagctcctagatgaagta
cttcacaccatgcctattgccgacccacagcctttagactga
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