Phocoena phocoena (harbor porpoise): 136132688
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Entry
136132688 CDS
T11058
Symbol
SBNO1
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136132688 (SBNO1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
136132688 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_4
AAA_34
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
136132688
NCBI-ProteinID:
XP_065745660
LinkDB
All DBs
Position
13:complement(83934562..83978613)
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AA seq
1372 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATPTPTPPVQQSVPLSALELGLETEAA
VPVKQEPETLPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAARNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQGVIAKISSMYVKALLYL
MIVTVCFNFIXRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQSYVKMYNKA
VKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEI
KNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRKKLYSLL
GIDLTAPSNNSSPRDSPCKENKIKKRKGEEITRESKKARKIGGLTGSSSDDSGSESDASD
NEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIRKDHKKNKDKKKKRSIDPDSIQ
SALLASGLGSKRPSFSSTPVISPAPNSAPANSNTNSNNSLITSQDAVERAQQMKKDLLDK
LEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILN
ITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRT
HRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKY
GRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIGVGLINVEDRSGILTLDKDYN
NIGKFLNRILGMEVHQQNALFQYFADTLTAVVHNAKKNGRYDMGILDLGSGDEKVRKSDV
KKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPDDGFYLSLQIRNNKKTAILV
KEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDALVHWLDQYNSSADTCTHAY
WRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTED
GQRIVGLIIPANCVSPLINLLSTSDQSQQLAVQQKQLWQQRHPQSIANLSNA
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctttgagcgagagtggaattagtccg
aatgacctctttgatattgatggtggagatgcggggcttgcaactccaacacctacccct
cctgtacagcagtcagtgccacttagtgcattagaactaggtttggagactgaagcagca
gttcctgttaaacaagaaccagagacgctacctactccagcactattaaatgttaggcag
cagcctccatctactacaacatttgtgctgaatcaaataaatcagcttccgactttggga
tctacgattgtaatgactaaaacaccacctgtaaccacgaataggcaaaccatcacttta
acaaagttcattcagactactgcaaacacacgtccttcagtctcagcaccagcagcacga
aatgccatgacctctgcaccttcaaaagaccaggttcaactgaaggacctactaaaaaat
aatagtctgaacgaactcatgaaactgaagccaccggctaatattgctcaaccagttgca
acagcagctactgatgtaagcaatggcacagtaaagaaagagtcttctaataaagaagta
gcaagaatatggataaatgacatgaaaatgaggagtttttccccgaccatgaaggtccct
gttgtgaaagaggaagatgaaccagaggaagaagatgaagaagaaatgggtcatgcggaa
acctatgcagagtatatgccaataaaactaaaaattggcctgcgtcacccagatgctgta
gttgaaactagttctttatccagtgttactcctcctgatgtttggtacaaaacgtctatt
tctgaagaaaccattgataatggctggttatcagcattacagcttgaggcaattacatat
gcagcccagcaacatgaaacattcctaccaaatggagatcgtgctggattcttaataggt
gatggtgctggtgtaggaaaaggaaggacaatagcaggaatcatctatgaaaattatttg
ttgagtagaaaaagggctttgtggttcagtgtttcaaatgatttaaagtatgatgccgaa
agagatctgagggatattggagcaaaaaacattttggtccattcattaaataagtttaaa
tatggaaaaatttcttccaaacataatgggagtgtgaagaagggtgtgatttttgctacc
tattcttccctcattggtgaaagtcagtctggtggtaaatacaaaacgaggttaaaacaa
ctcctacattggtgcggtgatgacttcgatggagtgatagtgtttgatgaatgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagcagtttta
gaacttcaaggtgttattgctaaaatctcttccatgtatgttaaagctctactatattta
atgatagttactgtgtgttttaattttattnncagaggtgttggtgccatggaaatagtt
gctatggatatgaagcttagaggaatgtacattgctcgacagctgagctttactggagtg
accttcaaaattgaggaagttcttctttctcagagctatgttaaaatgtataacaaagca
gtcaaactgtgggtcatcgccagagagcggtttcagcaagctgcagatctgattgatgct
gagcaacgaatgaaaaaatccatgtggggtcagttctggtctgctcaccagagatttttc
aaatacttgtgcatagcatccaaagttaagagggttgttcaactagctcgagaagaaatc
aagaatggaaaatgtgttgtaattggtctgcagtctacgggagaagctagaacattagaa
gccttggaagagggtggaggagaattgaatgatttcgtttcaactgccaaaggagtgttg
cagtcactcattgaaaaacacttccctgctccagacaggaaaaaactttatagtttgcta
ggcatcgatttgacagctccaagtaacaacagctcaccaagagatagtccttgtaaggaa
aataaaataaagaagcggaaaggtgaagaaataactcgagaatccaaaaaagcaagaaaa
ataggtggccttactggtagcagttctgatgatagtggaagtgaatctgatgcctccgat
aatgaagaaagtgactacgagagctctaaaaacatgagttctggagatgacgatgatttc
aacccatttagagatgagtctagtgaggatgatgaagatgatccctggttaatcagaaag
gaccacaagaaaaacaaagataaaaaaaaaaagagaagtatagatccagattctattcaa
agtgccttattagcatcaggtcttggatcaaaacgacctagtttttcttctacaccagta
atttcacctgctcctaacagtgcaccagctaacagtaacaccaacagcaacaatagcctt
ataacaagtcaggatgccgtggaaagggcccagcagatgaagaaagacctacttgataaa
ctagaaaaattagctgaagacctccctcctaataccctggatgaacttattgatgaactt
ggtggccctgagaatgttgctgagatgacaggccgcaaggggagggttgtaagcaatgat
gatggaagtatatcttatgagtcaagatctgaacttgatgtccctgtggaaatactaaat
atcacggaaaaacaaagatttatggatggagataagaatattgctatcatctcagaagct
gccagctccggtatttcattacaagcagataggagagctaaaaatcaaaggcgaagagtt
catatgaccctggaattaccatggagtgctgatagagcaatccagcagtttgggcgaact
catagatcaaaccaagttactgctccagaatacgtctttctgatttctgaattggcagga
gaacaaagatttgcatctattgttgctaaaagacttgagagtttgggtgcgcttacacat
ggagacagaagagcaacagaatccagagatctgagtaggttcaactttgataataagtat
ggaagaaatgctttagaaattgtcatgaaatccattgtaaacctagattctcctatggta
tcaccacctccagactatcctggagaattctttaaagatgttcgacaaggactaatagga
gttggcctgataaatgtagaagatcgttcaggaattcttactctagataaagattataac
aacataggaaaattcttaaatagaattttgggcatggaggtgcatcagcagaatgcgtta
tttcagtattttgcagacacacttactgcagttgttcacaatgccaaaaaaaatgggaga
tatgatatgggaatcttagatcttggttctggagatgaaaaagtgaggaaaagtgatgtt
aagaagtttctgactccaggatattcaacctctggccatgtagaattatacacgataagt
gtagagaggggaatgtcctgggaggaagctaccaagatttgggctgagttgacaggacca
gatgatggcttttatttgtcattgcaaataagaaacaacaagaaaactgccatcttagtt
aaagaagtgaatcctaaaaagaagcttttcttagtttatagaccaaatactgggaaacag
ctcaaattagaaatttatgctgatctaaaaaagaaatataagaaggtagtctcagacgat
gccctggtccactggttagatcagtataattcatctgcagatacttgcactcatgcttat
tggcgtggcaattgcaaaaaagcaagtttgggattagtttgtgaaataggtcttcgttgc
cgcacatactatgtattatgtggctcagtactgagtgtctggacaaaagtcgagggtgtt
ctcgcatctgtcagtggcacaaacgtgaaaatgcagatagttcggctaagaacagaggat
ggacagcggattgtaggtttgatcattcctgcaaattgtgtgtctcctcttataaatctc
ctgtcaacttcagaccagtctcaacagcttgcagtccagcagaaacagctctggcagcag
cgtcacccccagagcatcgccaatttgagcaacgcataa
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