Phocoena phocoena (harbor porpoise): 136132703
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Entry
136132703 CDS
T11058
Symbol
POLI
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
136132703 (POLI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136132703 (POLI)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136132703 (POLI)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
136132703 (POLI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
IMS_HHH
Cdd1
HHH_5
Motif
Other DBs
NCBI-GeneID:
136132703
NCBI-ProteinID:
XP_065745685
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Position
13:complement(20181583..20204596)
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AA seq
728 aa
AA seq
DB search
MERAEAWAAGSSPGALEPEEPGGLPWFHDQVVPAGSSSSRVIVHVDLDCFYAQVEMISHP
ELKGKPLGVQQKYLVVTCNYEARELGVKKLMNVRDAKEKCPQLVLVNGEDLTRYREMSYK
VTELLEEFSPVVERLGFDENFVDLTEMVEKRLEQLQSDEPSALTVSGHVYGNQPINLHDI
LHIRLLIGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGIFKPNQQTLLLPESSQD
LIHSLNHIKEMPGIGYKTTKRLEALGISSVRDLQTFSSKILEKELGISVAQRIQKLSFGE
DNSPVTPSGPPQSFSEEDSFKKCSSEVEAKNKIEELLASLLNRVCQDGRKPHTIRLIIRR
YSSEKHCSRESRQCAIPSHIIQKLGIGNYDVMTPMVDVLMKLFRNMVNVKMPFHLTLLSV
CFCNLKALNTAKKGTIDYYLTPSLSTTSRSGKHSFKMKDIHMEDFSKDKETNWDFLPTGR
IESTRTGESPPDATSFSKEKDSNEFPLSSLPAGIDQEVFKQLPVDIQEEILSGKSREKVQ
GKGSLSCPLHASRGVLSFFSTKQMQDGSLNPRDHLSNTKQISSVSPCAPGTSGLNSSSSS
YVSSQKDYSHYIDSNLKDELMSQGPKESQGFHFSKTDPAVSVFHSFPNVQSEQLFSKNCT
TDSHKQPMATVFIHEGLTENREQDSTEEKITFPSDIDPEVFYELPEEVQKELLADWKRTG
SDFHTVHK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgaggcgtgggcagccggcagctcgccgggtgcgctggagcctgaggag
cccggcggcctcccttggttccatgatcaagtggtgccagctggaagttcttcatctaga
gtcatagtacacgtggatctggattgcttttacgcacaagtagaaatgatctcacatcca
gaactaaagggcaaacctttaggggttcagcagaaatatttggtggttacctgcaactat
gaagctagggaacttggagttaagaaacttatgaatgtcagagatgcaaaagaaaagtgt
ccacagctagtattagttaatggagaagatttgactcgttacagagagatgtcatataag
gttacagagttgttggaagaatttagtccagttgttgagagactcggatttgatgaaaat
tttgtggatctaacagaaatggttgagaagagactagagcagcttcaaagtgatgaaccc
tcagcactgactgtgtcgggtcatgtatacggtaatcagcctataaacctgcatgacatc
ttgcacatcagactacttattggatctcagattgcagctgagatgcgggaagccatgtat
aatcagttgggtctcacaggctgtgctggagtggcttctaataaattattggcaaaatta
gtgtctggcatctttaaaccaaatcagcaaacactcttactacctgaaagttctcaagat
ctcattcatagtttgaaccacataaaggaaatgcctggtattggctataaaactaccaaa
cgtctggaagcactgggtatcagtagtgtgcgtgatcttcaaaccttttcatccaaaata
ctagaaaaggagttaggcatttcagttgctcagcgtatccagaagctcagttttggagag
gataactctcctgtgaccccctcaggacctcctcagtcctttagtgaggaagattcattt
aaaaaatgttcatcagaagttgaagctaaaaataagattgaagaactacttgctagtctt
ttgaacagagtctgccaagacggaaggaagccacatacaataagattaataatccgtcgg
tattcatctgagaagcactgtagccgtgagagtcgtcagtgcgcaattccatcccacata
attcagaagttagggataggaaattatgatgtgatgaccccaatggttgatgtacttatg
aaactttttcgaaatatggtgaatgtgaagatgccatttcatctcacccttttaagtgtg
tgcttctgcaaccttaaagccctaaatactgctaagaaagggactattgattattattta
acaccatcattatcaacaacttcacgctctggcaagcacagttttaaaatgaaagacatt
catatggaggatttttctaaagacaaggaaacaaattgggattttctaccaactggaaga
attgaaagtacaagaactggggagtctccaccagatgctacaagtttttctaaagaaaaa
gacagtaacgaatttccactctcctcacttcctgcgggtattgaccaagaggtatttaag
cagcttccagtagatattcaagaagaaatcctttctggaaaatctagagaaaaagttcaa
gggaaaggaagtttgagttgtccattacatgcttctagaggagtattatctttcttttct
acaaaacaaatgcaagatggttccttaaatcctagggatcatttatccaataccaaacag
atatcctctgtatctccctgtgcaccaggaacatcaggtttaaatagcagtagttcctct
tacgtgtctagccaaaaggattattcacattatatagacagtaacttaaaagatgaacta
atgagtcaaggacctaaagagtctcaaggattccacttttcaaaaacagaccctgctgta
tctgttttccattcatttccaaatgtgcagagtgagcaacttttctccaaaaactgcact
acagacagccataaacaaccgatggcaacagtctttattcatgaaggacttacagaaaat
agagagcaagattctaccgaagagaaaattacttttccttctgacattgatcctgaagtt
ttctatgaactaccagaagaggtacaaaaagaactgttggctgattggaagagaacagga
tcagatttccacactgtacataaataa
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