Phocoena phocoena (harbor porpoise): 136132831
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Entry
136132831 CDS
T11058
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
KO
K12825
splicing factor 3A subunit 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
Spliceosome [BR:
pphc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
136132831 (SF3A1)
Complex B
136132831 (SF3A1)
Complex C
U2 SnRNP specific factors
136132831 (SF3A1)
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Gene cluster
GFIT
Motif
Pfam:
PRP21_like_P
Surp
ubiquitin
Ubiquitin_2
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
136132831
NCBI-ProteinID:
XP_065745910
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Position
13:67404264..67424457
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AA seq
793 aa
AA seq
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MPAGPVQAVPPPPPAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgcggccaccgagcccaaa
cagcccacagaagaggaagcatcttcaaaggaggattctactccttccaagccagtggtg
ggtattatttaccctcctccagaggtcaggaatatcgttgacaagactgccagcttcgtg
gccagaaacggacctgaatttgaagctaggatacgacagaacgagatcaacaaccccaag
ttcaacttcctgaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaagcccaggagccttcggctgccatccccaaggtcatgcagcagcag
cagcaagccacccagcagcagctgccccagaaggttcaagcccaagtgatccaagaaacc
atcgtgcccaaagagccccctcccgagttcgagttcattgcagaccccccctctatctca
gccttcgacctggacgtggtgaagctgacggctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgacttccttcgcccg
caacacagccttttcaactacttcacgaagctggtggaacagtataccaagatcttgatt
ccacccaaaggcttatttaccaaactcaagaaagaggcagagaacccccgggaagttttg
gaccaggtatgttaccgggtggagtgggccaagtttcaggagcgtgagaggaagaaggaa
gaggaggagaaggaaaaggaacgggtggcctatgctcagattgactggcatgattttgtg
gtggtggaaacagtggacttccagcccaatgagcaagggaacttccctccccccaccacc
ccagaggagctgggggcccgaatcctcattcaggagcgctacgagaagtttggggagagt
gaggaggtcgagatggaggtcgagtctgatgaggaggacgagaaacaggagaaggcggag
gagcctccgtcccagctggaccaggacacccaagtgcaagacatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacctccagagacacccatgccaccgcctctg
cccccaactccagaccaggtcattgtccggaaggactatgacccaaaagcttccaagccc
ctgcctccagcccctgctccagatgaatatctcgtgtcccccatcactggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattgggcttcttgacccccgttggctggag
cagcgagaccgctccattcgtgagaagcagagtgatgatgaggtgtacgcaccaggtctg
gatattgagagcagcttgaaacagctggctgagcggcgtaccgacatctttggtgtagag
gaaacggccattggtaagaagattggcgaggaggagatccagaagccagaggaaaaggtg
acctgggatggccattccggcagcatggcccggacccagcaggctgcccaggccaatatc
accctccaggagcagatcgaggccatccacaaggctaagggcttggtgccagaagatgat
accaaagagaagattggccccagcaagcccaatgaaatcccccagcagccaccacctccg
tcttcagccaccaacatccccagctcagccccacccattacctcggtgcctcggccaccc
gcgatgccacctcctgtccgtaccacagttgtgtctgcagtacccgtcatgccccggccc
ccgatggcatcagtggtccgactgcctcctggttcggtgatcgcccccatgccaccgatc
atccatgcgcccaggatcaacgtggtgcccatgcctccctcggcccctcctatcatggca
ccccgcccaccacccatgattgtgccgacagctttcgtgcccgcaccacctgtggcaccc
gtcccagctccagcccctatgccgcctgtccacccaccacctcccatggaagatgagcct
gcctccaagaaactgaagaccgaggacagcctcatgccagaagaggagtttctacgcaga
aacaagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aagctgaacggacaggtgctggtcttcaccctcccactcacagaccaggtctctgtcatc
aaggtgaagattcacgaagccacgggcatgccggcagggaaacagaagctgcagtatgag
ggtattttcatcaaggattccaactcgctggcttactataacatggctaatggtgccatc
atccacctggcgctcaaggagagaggcgggaggaagaagtag
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