Phocoena phocoena (harbor porpoise): 136132929
Help
Entry
136132929 CDS
T11058
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
136132929 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136132929 (MYO5B)
04131 Membrane trafficking [BR:
pphc04131
]
136132929 (MYO5B)
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136132929 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136132929 (MYO5B)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
136132929 (MYO5B)
mRNA cycle factors
P-body specific factors
136132929 (MYO5B)
Membrane trafficking [BR:
pphc04131
]
Others
Actin-binding proteins
Myosins
136132929 (MYO5B)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
136132929 (MYO5B)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
136132929 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
DUF1515
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
136132929
NCBI-ProteinID:
XP_065746063
LinkDB
All DBs
Position
13:24007133..24238031
Genome browser
AA seq
1714 aa
AA seq
DB search
MGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASDTN
IEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYRIIGANMRTYLLEKSRVVF
QADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTSQGGDTSIEGVDDAEDFEKTRQA
FTLLGVRESHQINIFKIIASILHLGNVEIQAERDGESCSISPKDEHLSNFCQLLGVEHSQ
MEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFGWIVGHVNKALHTSLKQH
SFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEQIPWTLIDFY
DNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSGSQHFQKPRMSNTAFIVV
HFADKVEYLSDSFLEKNRDTVYEEQINILKASKLPLVADLFHDGKDSAPAAATSSKISVR
SARPLLKASNKEHKKTVGHQFRTSLHLLMETLNTTTPHYVRCIKPNDEKLPFRFDPKRAA
QQLRACGVLETIRISAAGYPSRWAYHDFYNRYRVLVKKKELANTDKKAICKSVLESLIKD
PDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATITIQKTVRGWLQKVKYRRLKAATLTLQ
RYCRGHLARRLAEHLRRTRAAVVLQKQYRMRRAHQAYQRVRRATVVIQAFARGMFVRRIY
HQVLREHKATIIQKHVRSWLARRCFQRLRGAAIVIQCGFRRLKAKRELKALKIEARSAEH
LKRLNVGMENKVVQLQRKIDDQNKEFKMLSEQLSAITSTHATEVEKLKEELACYQQSQDG
DSSPQLQEEVESLRTELQRAHSERKVLEDAHTREKDELRKRVADLEQENALLKDEKEQLN
NQILCQSKDELAQTSVEENLLMKKELEEERSRYQNLVKEYSRLEQRYDNLRDEMTIIKQT
PGHRRNPSNQSSLESDSNYPSISTSEVGDAEDALQQVEEIGLEKAAMDLTVFLKLQKRVR
ELEQERKKLQVQLEKKEQQDSKKIPAEQPSSDLDVDQDADLAYNSLKRQELESENKKLKN
ELNELRKAVADQASEHSAAHGTPDSYCLLLNQLKLAHEELEVRKEEVLILRTQIVSADQR
RLAGKGSEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNSKTEDWGYLNEDGELGLAYQ
GLKQVARLLEAQLQAQSREHGEEVEGLKAQVQALKEEMDEQQQTFCQTLLLSPEAQLEFG
IQQELSRLTNENLDLKELVEKLEKNERKLKKQLKIYMKKVQDLEATQALAQSDRRRHELN
RQVTVQRKEKDFQGMLECRKEDEALLIRNLVTDLKPQALAGTVPCLPAYILYMCIRHADY
VNDDLKVHSLLTSTINGIKKVLKKHNDDFEMTSFWLSNTCRLLHCLKQYSGDEGFMTQNT
AKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKISEGLLQPMIVSAMLENESIQGLSGVK
PTGYRKRTSSLADGDNSYCLEAIIRQMNSFHTVMCDQGLDPEIILQVFKQLFYMINAVTL
NNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLHQREVAETMEPLIQAAQLLQLKKKSP
EDAEAICSLCTALSTQQIVKILNLYTPLNEFEERVTVAFIRTIQAQLQERNDPQHLLLDF
KHMFPVLFPFNPSSLTMDSIHIPACLNLEFLSEV
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgggggatatggaccctcacatctttgctgtggccgaggaagcctacaagcagatggcc
agagatgagaagaaccagtccatcatagtcagcggggagtctggagccggcaagaccgtg
tcggccaagtacgccatgcgctatttcgccacggttagtggctcggccagtgacaccaac
atcgaagagaaggtcctggcgtccagtcccatcatggaggccattgggaatgctaaaacc
actcgcaatgacaacagtagccgtttcggaaagtacattcagattggctttgacaagagg
tatcgcatcattggggccaacatgaggacctaccttttggagaagtccagagtggtcttt
caggcggatgatgagaggaattaccacatcttttaccagctctgcgcggctgccagtctt
ccggaatttaaagagctcgcactaacctgtgccgaggacttcttctatacatcacaggga
ggagacacgtccatcgagggtgtagatgatgctgaggactttgagaagactcgacaagcc
ttcacactccttggagtgagagagtcccatcagataaacatttttaagataattgcttcc
atcctacacctcggaaatgtggagattcaagccgagcgcgatggtgaatcctgtagtata
tcacccaaggatgaacacctgagcaacttctgccagctgctgggggtggagcacagtcag
atggagcattggctgtgccatcgcaagctggtcaccacctcggagacctacgtcaagacc
atgtccctgcagcaggtggtcaacgcgcgcaacgccctggccaagcacatctacgcccag
ctgtttggctggatagtggggcatgtcaacaaggccctccacacctccctcaagcagcac
tccttcatcggggtcctggacatctacgggtttgagacgtttgacgtgaacagctttgag
cagttttgtatcaactatgcgaatgagaagctccaacaacagttcaacttgcatgtattc
aagttggagcaagaggaatacatgaaggagcagatcccttggaccttgattgatttttat
gataaccaaccttgtattgacctcatagaagctaagctgggcatcttggacctgttggat
gaagaatgtaaggtccccaaaggaactgaccagaactgggctcagaagctctacgaccgg
cactccggcagccagcacttccagaaaccccgcatgtccaacacggccttcattgtcgtc
cactttgcagataaggtggagtacctttcagatagttttctggagaaaaacagagacacg
gtgtacgaagagcagatcaatattctgaaggccagcaagctccccctggtggctgacttg
ttccacgatggcaaagactctgctcctgctgccgccacgtcttcaaagatcagcgttcgc
tctgccagacccctgctgaaagcctccaacaaggagcacaagaaaaccgtgggccaccag
ttccgcacctccctgcacctgctcatggagaccctgaacaccacaacgccgcactacgtc
cgctgcatcaagcccaacgacgagaagctccccttccgctttgacccgaagagagcagcg
cagcagctccgagcgtgcggggtgttggagaccattcggatcagcgcagctggctacccg
tccaggtgggcctaccatgacttctacaaccggtatcgggtgctggtcaagaagaaagag
ctcgccaacacagacaaaaaggccatctgcaagtctgtgctggagagcctcattaaggat
cctgacaagttccagtttggccgcaccaagatcttcttccgggcaggccaggtggcctac
ctggagaagcttcgggctgacaagttccgggcagccaccatcacgatccagaaaaccgtc
cggggctggctgcagaaggtgaaataccgcaggttgaaggcagctaccttaactctgcag
aggtactgccgaggacacctggcccgcaggctggccgagcatctgcggaggacccgggcg
gccgtggtgctccagaagcagtaccgcatgcggagggctcaccaggcctaccagagggtc
cgcagggccaccgtcgtcatccaggccttcgctcggggcatgtttgtacggagaatctac
caccaggtcctcagggagcacaaggccaccatcatccagaagcacgtgcggagctggctg
gctcgcaggtgcttccagcggcttcggggcgcggccattgtcatccagtgcggcttccgg
aggctcaaggccaagcgggagctgaaggccctcaagattgaggcccgctcagcagagcac
ctaaaacgcctcaacgtgggcatggagaacaaggtggtccagctgcagcggaagatcgac
gaccagaacaaagagttcaagatgctgtcggagcagctgtcagccatcacctccacacat
gccacggaggtagagaagctgaaggaggagctggcctgctaccagcagagccaggatggg
gacagcagcccgcagctgcaggaggaggtcgagagcctgcgtacagaactgcagagggcc
cactcggagcgtaaggtcctggaggacgcccacacccgggagaaggacgagctgagaaag
cgagttgcagacctggagcaagaaaatgccctcttgaaagatgagaaggaacagcttaac
aaccaaatcctgtgccaatctaaagatgaacttgcccagacctccgtcgaggaaaacctc
ctgatgaagaaggagctggaggaggaacgctcccggtaccagaacctcgtgaaggaatat
tcccggctggagcagagatacgacaacctccgggacgagatgaccatcataaagcaaacc
ccaggccacaggcggaacccatcaaaccagagtagcttagaatctgactctaattacccc
tccatctcgacatctgaggtcggagacgcagaagatgccctccaacaggtggaggaaatt
ggcctggagaaggcggccatggacctgacagtcttcctgaagctgcagaagagggtgcga
gagcttgagcaggagaggaagaaactgcaggtgcaactggagaagaaagaacagcaggat
agcaagaaaatcccggcagaacagccaagcagtgacttagatgtggaccaggatgcagat
ctagcctacaatagtctgaagaggcaggagctggagtcggagaacaagaagctgaagaat
gagctgaacgagctgaggaaagccgtggccgaccaagcctcagagcacagcgccgcccac
ggcacccctgacagctactgcctcctgctgaaccagctcaagctggcccacgaggagctg
gaggtgcgcaaggaggaggtgctcatcctgaggacccagatcgtgagcgccgaccagcgc
cgcctggctggcaagggctcggagccaaacatcaatgccagaacaagttggcctaacagt
gaaaagcacgtggatcaagaagacgctatcgaggcctatcacggggtctgccagacgaac
agcaagactgaggattggggatacttgaatgaagatggagagctcggcttggcctaccaa
ggcctaaagcaagttgccaggttgctggaggcccagctgcaggctcagagccgtgagcac
ggggaggaggtggagggtctcaaggcccaggtgcaggccctgaaggaggagatggacgag
cagcagcagaccttctgccagacgctactgctgtccccagaggcccagctggagttcggc
atccagcaggagctgtcccggctgaccaatgagaacctggaccttaaagaactggtggaa
aagctggagaagaacgagaggaagctcaaaaagcaactgaagatttacatgaaaaaagtc
caggacctggaagccacccaggcactggcccagagtgacaggaggcgccacgagctcaac
aggcaggtcacggtgcagcggaaagagaaggacttccagggcatgctggagtgccgcaag
gaggatgaggccctgctcattcggaatctggtgacagacctgaagccccaggcgctggcg
ggcaccgtgccttgcctccctgcctacatcctctacatgtgcatcaggcacgcggactac
gtgaacgacgacctcaaggtgcactccctgctgacctccaccatcaatggcattaagaag
gtcctcaagaagcacaatgatgactttgagatgacatcgttctggttgtccaatacctgc
cgcctcctgcattgcttgaagcagtacagcggggatgagggcttcatgactcagaacacg
gcgaagcagaatgagcactgtcttaagaatttcgacctcactgaataccgccaggtgctg
agcgacctttccattcagatctaccagcagctcattaaaatctccgagggcctgttgcag
ccgatgatagtgtctgccatgttggagaacgagagcattcagggtctgtctggggtgaag
cccacgggctaccggaagcgtacctccagcctggcggatggagataactcctactgcctg
gaagccatcatccgccagatgaattccttccacacagtcatgtgcgaccagggcctggac
cccgagatcatcctgcaggtgttcaaacagctcttctacatgatcaacgcggtgactctc
aacaacctgcttctgaggaaggacgtctgctcctggagcacaggcatgcagctcaggtac
aatataagtcagttggaggagtggcttcggggaagaaacctgcaccagagggaagttgct
gagaccatggaacctctgatccaagcagcccagctcctgcagttaaagaagaaaagcccc
gaagatgcagaggccatctgttccctgtgcaccgccctcagcacccagcagattgtcaaa
attttgaacctttatactcccctgaatgaatttgaagaacgggtaaccgtggcctttata
cgaacaatccaggcacaactgcaagagcggaatgaccctcagcacctgctgttagacttc
aagcacatgtttcccgttttgttcccatttaatccatcttctctgaccatggactcaatc
cacattccagcgtgtctcaacctggagttcctcagtgaagtctga
DBGET
integrated database retrieval system
