Phocoena phocoena (harbor porpoise): 136133027
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Entry
136133027 CDS
T11058
Symbol
DSC3
Name
(RefSeq) desmocollin-3 isoform X1
KO
K07602
desmocollin 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136133027 (DSC3)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Major cadherins
136133027 (DSC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Fibulin_C
Big_9
Cdc13_OB4_dimer
Motif
Other DBs
NCBI-GeneID:
136133027
NCBI-ProteinID:
XP_065746184
LinkDB
All DBs
Position
13:44349285..44387392
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AA seq
890 aa
AA seq
DB search
MAAAGPQNSLRGALCRQLLTLVVFSFACEACKKVIFHIPSQLEADKVLGRVNLKECLGSA
DHIQSSDPDFRVLEDGSVYTAHAVVLSDEKRYFTIWLSDSEKQTQKEIPVLLEHQKVFKV
LRKRHTKETVLRRSKRRWAPIPCSMQENSLGPFPLFLQQVQSDAAQNYTVFYSISGRGVD
QEPLNLFFIERDTGNLYCTRPVDREEYDVFDLIAHASTADGYTADLPLPLPIRVEDENDN
YPVFTEAIYNFEVPESSRIGTTVGVIYATDRDEPDTMHTRLMYSILEQTPGKPGIFSVHP
STGVITTVSYYLDREVVDKYSLIMKVQDMNGQFFGLMNTATCIITVKDSNDNLPSFRQNA
YEASVEENTFDVEILRMPVEDMDLINTANWRANFTILKGNENGHFKISTDKETNEGVLCV
VKPLNYEENRQMILEIEVGNEAPFTGDVTLRMANMNRAVVTVDVKDQDEGPECRPAVQYV
QIKENSPVGSKINGYEAYDPETRSSSGLRYKLLHDPKGWITINEISGSFKTSKILDREAV
TPISALYNVTVLAIDKDGRSCTGTIAVKIEDKNDNPPEILQNYLVICKPKMEYVDISAVD
PDEPIHGPPFHFSLAKTSPDINRLWTLAKVNDTAARLSYRKDAKFQEYDISITVKDGEGQ
SATKTLRVNLCDCTHPDQCRVTAGAILGKWAILAILLGIALLFSILLTVVCGLVSARNEK
SFPEDLAQQNLIISNTEAPGDDKVCSANGFTTDTVNNSSQGFCGTMGSEVKNGRQETIEM
VKGGNQTLELCQGAGHHRTLDSCRGGTVEMDHSEWYNFTQPRLGEKLHLCNQDEDHMPSQ
DYVLTYNYEGRGSPAGSVGCCSEEQEEDGLDFLNNLETKFTALAETCTKK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgggccccagaactccctgcgcggagctctctgcaggcagctgctaacc
cttgtggtcttcagttttgcatgtgaagcttgcaaaaaggtgatatttcatataccttcc
caactagaggcagacaaagtgcttggcagagttaatttgaaagagtgcctcggatctgca
gaccacatccaatccagtgatcctgatttcagagttctagaagatggatcagtatacaca
gcccatgctgttgtgttgtctgatgagaaaagatatttcaccatatggctttctgactca
gagaaacagacacagaaagagattcctgtgctcctggaacatcagaaggtattcaaagta
ctgaggaagagacacactaaagagactgttcttaggcgttccaagaggagatgggcgcct
atcccctgctcaatgcaagagaattccttgggccctttccctttgttccttcaacaggtt
cagtctgacgcggcacagaactataccgtcttctactcaataagtgggcgtggagttgac
caagaacctttaaatctgtttttcatagaaagagacactggaaatctgtattgtacccgg
cctgtggatcgtgaagaatatgatgtttttgatctgattgcccatgcgtcaactgcagat
gggtatacagcagacttacctcttccactgcccatcagagtggaggatgaaaacgacaac
taccctgttttcacagaagcaatttataattttgaagttccagaaagcagtagaattggt
actacagtgggagtgatttatgccacagacagagatgaaccagacacgatgcatacgcgc
ctgatgtatagcattttggagcagacgccaggaaaacctgggatcttttctgtgcatccc
agcacaggtgttatcacaacagtctcttattatttggacagagaggttgtagacaagtac
tcattgataatgaaagtgcaagacatgaatggtcaattttttggattgatgaatacagca
acttgcatcataacagtaaaagattcaaatgacaatctacccagtttcagacaaaatgct
tatgaagcatcagtagaggaaaatacgttcgatgtggaaatcttacgaatgcctgtagaa
gatatggatttaattaacactgccaattggagagccaattttactattttaaagggcaat
gaaaatggacatttcaaaatcagtacagacaaagaaactaatgaaggtgttctctgtgtt
gtaaagccactgaattatgaagaaaaccgtcaaatgatcctggaaattgaagtaggcaat
gaagctccatttactggagatgtgacactcagaatggcaaacatgaacagagccgtggtc
acagttgatgtgaaggatcaggacgaagggcctgaatgcagacctgcagtccaatatgta
cagattaaagaaaactccccagtgggttcaaagatcaatggatatgaggcatatgaccct
gaaactagaagtagcagtggtttaaggtacaaattattgcatgacccgaaagggtggatc
accattaatgaaatttcgggctcattcaaaacttccaaaatcttagacagggaggctgta
actcccataagtgccttgtataatgttacagtcctggcaatagataaagatggtagatca
tgtactggaaccattgcagttaaaattgaagataagaatgataatccaccagaaatactt
caaaattatctagtaatttgcaaaccaaagatggagtatgttgacatttcagctgttgat
cctgacgagcccatccacggccctccatttcacttcagcttggcaaaaacttctccagat
atcaacagactatggacccttgccaaagttaatgatacagctgcccgtctttcatatcgg
aaagatgccaaatttcaagaatatgatatttccattaccgtaaaagatggagaaggtcaa
tctgcaacaaaaaccttgagagtgaacctctgtgattgtactcacccagatcaatgtcgc
gtgactgcaggagcgatacttggcaaatgggcgatcctcgcgatacttctgggtatagca
ttgcttttctctatattgctaactgtagtatgtggacttgttagtgccagaaatgaaaaa
agttttcctgaagatttggcacagcaaaacttaatcatctcaaacacagaagcacctgga
gatgataaagtgtgttctgccaatggctttacgaccgatacagtcaacaactctagccaa
ggcttttgtggtactatgggatcagaagtcaaaaatggcaggcaggaaaccattgaaatg
gtaaaaggaggaaaccagaccttggaattgtgccagggggccgggcatcatcgcaccctg
gattcctgcagaggaggcactgtggagatggaccactcggagtggtacaatttcactcag
ccccgccttggtgaaaaactgcatctatgtaatcaggatgaagaccacatgccatctcaa
gattatgttcttacgtataactatgaaggaagagggtctccagctggttctgtaggttgc
tgcagtgaagaacaggaagaggatggccttgactttttaaataatttggagaccaaattt
actgccttagcagaaacatgcacaaagaaataa
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