Phocoena phocoena (harbor porpoise): 136133181
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Entry
136133181 CDS
T11058
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1 isoform X1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136133181 (SNRPD1)
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
136133181 (SNRPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136133181 (SNRPD1)
03032 DNA replication proteins [BR:
pphc03032
]
136133181 (SNRPD1)
Spliceosome [BR:
pphc03041
]
Complex A
U1 snRNP components
Sm proteins
136133181 (SNRPD1)
U2 snRNP components
136133181 (SNRPD1)
Complex B
U1 snRNP components
136133181 (SNRPD1)
U4/U6.U5 tri-snRNP components
136133181 (SNRPD1)
Complex C
U2 snRNP components
136133181 (SNRPD1)
DNA replication proteins [BR:
pphc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
136133181 (SNRPD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
YomU_Tube
Gemin7
Hfq
AAA_RNF213_3
Phage_Hfq
SM-ATX
API5
Motif
Other DBs
NCBI-GeneID:
136133181
NCBI-ProteinID:
XP_065746491
LinkDB
All DBs
Position
13:complement(52135598..52145806)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtgagatttttgatgaaattgagtcacgaaactgtaaccattgaattaaag
aatggaacacaggtccatggaacaatcacaggtgtagatgtcagcatgaatacacatctt
aaagctgtgaaaatgaccctgaagaacagagaacctgtacagctggaaacactgagtatt
cgaggaaataacattcgatattttattctgccagacagcttacctctggatacacttctt
gtggatgttgaaccaaaggtgaagtctaagaaaagggaagctgttgcaggaagaggccga
ggccgaggaagaggaagaggacgtggccgaggaagaggaagagggggtcctaggcgataa
DBGET
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