Phocoena phocoena (harbor porpoise): 136133257
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Entry
136133257 CDS
T11058
Symbol
CHML
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 2
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pphc01006
]
136133257 (CHML)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136133257 (CHML)
Prenyltransferases [BR:
pphc01006
]
Protein prenylation
Rab geranylgeranyltransferase
136133257 (CHML)
Membrane trafficking [BR:
pphc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136133257 (CHML)
Endosome - Lysosome transport
Rab GTPases and associated proteins
136133257 (CHML)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
FAD_binding_2
DAO
Motif
Other DBs
NCBI-GeneID:
136133257
NCBI-ProteinID:
XP_065746565
LinkDB
All DBs
Position
1:complement(157230362..157232317)
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AA seq
651 aa
AA seq
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MDNRLPTEFDVVVIGTGLPESILAAACSRSGQRVLHLDSRSYYGGNWASFSFSGLLSWLK
EYQQNSDIGEESTAAWQDMIHETEEGITLRKKDETIQHTEVFCYASQDVDGNIEETDDLQ
KNPSWVASSTLIKPLDSACLSEEMHSLYVSSYEVPAKGTPENNGEVTDIAETLVKEEYCG
YKTYKHRVSDGAKDEIKPILEDNSDPPKRNRITYSQIVEEGRRFNIDLVSKLLYSQGLLI
DLLIKSNVSRYAEFKNVTRILAFREGKVEQVPCSRADVFNSKELTVVEKRMLMKFLTFCL
DYEQHPDEYQAFTQCSFSEYLKTKKLTPSLQHFVLHSIAMMSESSCTTIEGLKATKNFLQ
CLGKFGNTPFLFPLYGQGEIPQCFCRMCAVFGGIYCLRHKVQCLVVDKESGRCKAIIDHL
GQRINAKYFIVEDSYLSEETCSNVQYEQISRAVLITDQSILKTDSDQQISILIVPPVEPG
ACAVRVTELCSSTMTCMKDTCLVHLTCSSSKTAREDLESVVKKLFTPYAETEIDKEELAK
PRLLWALYFNMRDSSGVSRSSYNGLPSNVYVCTGPDCGLGNEHAVKQAETLFKEIFPSEE
FCPPPPNPEDVFFDGDDKQPEPLGANTIIIAQLESSEGSKNLESSEKHLQN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaggctcccaacagagtttgatgtggttgtaatagggacaggtttgcctgaa
tccatcctcgcagctgcatgttctagaagtggtcagagggttctgcatcttgattcaaga
agttactatggaggaaactgggctagtttcagcttttcaggattgctctcctggttgaag
gaatatcagcaaaacagtgacattggggaagaaagtactgctgcatggcaagacatgatc
catgaaacagaagaaggcatcactcttcgcaagaaggatgaaaccattcaacacacagaa
gttttttgttatgccagtcaggatgtggatggcaatattgaagagactgatgatctgcag
aaaaatccttcctgggtagcatctagtaccctcattaaacctctggattctgcgtgcttg
tctgaagaaatgcactcgttatatgtttctagctatgaagtgcctgcaaaagggactcca
gaaaacaatggagaagtaactgatatagcagaaaccttggtgaaagaagaatattgtgga
tataaaacttataaacacagagtttcagatggtgctaaagacgaaatcaaacctatattg
gaagacaacagtgatccaccaaagagaaacaggattacttactctcaaatagttgaagaa
ggcaggaggtttaatattgatttggtatcaaagctgctttattcccaaggactgttaatt
gatcttttaatcaaatcaaatgttagtcgttatgcagaatttaaaaatgtcactaggatt
cttgcatttcgagaaggaaaagtagagcaggtgccttgctccagagcagatgtctttaat
agcaaagagctcactgtggttgaaaagaggatgctaatgaaatttcttacattttgttta
gactacgagcaacatcctgatgaataccaagctttcacgcaatgctcattttcagagtac
ttaaaaaccaaaaaattaacccccagcctccaacattttgtactacactcaattgcaatg
atgtcagagtcatcttgcacaacaatagaaggccttaaagcaacaaaaaactttcttcag
tgtcttggaaagtttggcaacactccctttttatttcctttgtacggccaaggagaaatt
ccccagtgtttctgcaggatgtgtgcagtttttggtggaatatattgtcttcgccataaa
gtacaatgccttgtagttgacaaagaatctggaagatgtaaagcaattatagatcacctt
ggtcaaagaataaacgctaaatatttcattgtggaggatagttacctttctgaggaaaca
tgctcaaatgtgcagtacgaacagatctccagggcagtgctcattacggatcagtctata
ctaaagacagattcagatcagcagatttccattttgatagtacctccagtggaaccagga
gcatgtgctgttcgagtcactgaattgtgttcttcaaccatgacgtgcatgaaagacacc
tgtctggtacatctgacctgttcatcttccaaaacagcaagagaagacttagaatcagtg
gtgaagaaattattcaccccatatgctgaaacggaaatagacaaggaagaacttgcaaag
ccaagactcttgtgggctctttattttaacatgagagattcctcaggagtcagcagaagc
tcatataatggcttaccttccaatgtttatgtctgcactgggcctgactgtggactagga
aatgaacacgcagtcaagcaagctgaaacactcttcaaggagatctttccaagtgaagaa
ttctgccccccacctccaaatccagaagacgttttctttgatggtgatgataagcaacca
gagcctcttggagccaatactataataatagcccaactagaatcctctgagggaagcaaa
aacctagaaagctcagagaagcaccttcaaaattag
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