Phocoena phocoena (harbor porpoise): 136133329
Help
Entry
136133329 CDS
T11058
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03272
Virion - Hepatitis viruses
pphc04145
Phagocytosis
pphc04913
Ovarian steroidogenesis
pphc04925
Aldosterone synthesis and secretion
pphc04927
Cortisol synthesis and secretion
pphc04934
Cushing syndrome
pphc04975
Fat digestion and absorption
pphc04976
Bile secretion
pphc04977
Vitamin digestion and absorption
pphc04979
Cholesterol metabolism
pphc05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
136133329 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
136133329 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
136133329 (SCARB1)
04925 Aldosterone synthesis and secretion
136133329 (SCARB1)
04927 Cortisol synthesis and secretion
136133329 (SCARB1)
09154 Digestive system
04976 Bile secretion
136133329 (SCARB1)
04975 Fat digestion and absorption
136133329 (SCARB1)
04979 Cholesterol metabolism
136133329 (SCARB1)
04977 Vitamin digestion and absorption
136133329 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
136133329 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
136133329 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136133329 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphc04147
]
136133329 (SCARB1)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
136133329 (SCARB1)
Exosome [BR:
pphc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136133329 (SCARB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
Motif
Other DBs
NCBI-GeneID:
136133329
NCBI-ProteinID:
XP_065746661
LinkDB
All DBs
Position
13:complement(85073508..85152681)
Genome browser
AA seq
511 aa
AA seq
DB search
MGSRSRARRVAAALGFAGLLCAVLGVIMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIP
VPFYLSVYFFDVVNPNEILQGQKPQVRERGPYVYREFRHKSNVTFNDNDTVSFLEYRSFQ
FQPDKSRGLESDSIVMPNILVLSAAMMMENGPMSLKLIMTLAFSTLGERAFMNRTVSEIM
WGYEDPLIHLVNKYFPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKNFSRIHLVDKWNGV
SKVNFWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFR
FVAPNTLFANGSVYPPNEGFCPCRESGIQNVSACRFNAPLFLSHPHFYNADPVLAEAVSG
LHPNPEEHSLFLDIHPVTGIPMNCSVKLQLSLYIKSVKGIGQTGKIEPVILPLMWFGEVR
LGAMEGETLQTFYSQLVLMPKVLHYAQYVLLALGCVLLLIPIVYQIRSQEKCYLFWSSSK
KGSKDKEAIQAYSESLMTSAPKGTVLQEARL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgctctagagcgcgccgggtggccgcggcgctgggcttcgccgggctgctg
tgcgccgtgctgggcgttatcatgatcgtgatggtgccctcgatcatcaagcagcaggtc
ctcaagaatgtacgcattgaccccagcagcctgtccttcaacatgtggaaggagatcccc
gtccccttctacctctctgtctactttttcgatgtcgtcaaccccaacgagatcctccaa
ggccagaagccgcaggtgcgggagcgcggaccctacgtgtacagggagttcagacacaaa
agcaacgtcaccttcaacgacaacgacacggtgtccttcctcgagtaccgcagcttccag
ttccagcctgacaagtcccgcggcctagagagcgacagtatcgtcatgcccaacatcctg
gtcttgagtgcagcaatgatgatggagaacgggcccatgagcctgaagctgatcatgacc
ttggcgttcagcacccttggtgaacgtgccttcatgaaccgcaccgtcagcgagatcatg
tggggctatgaggatcccctcatccacctcgtcaataagtacttcccaaacatgttcccc
ttcaagggcaagttcgggctatttgctgagctcaacaactctgattccgggctcttcacc
gtgttcacgggggtcaaaaacttcagcaggatccatctcgtggacaagtggaacggggtc
agcaaggtcaacttctggcattccgatcagtgcaacatgattaacgggacttccgggcag
atgtgggcaccatttatgactcctgaatcctcgctggaattctacagccccgaggcctgc
cggtccatgaagctcatctacaaggagcagggggtgttcgaaggcatccccacctttcgc
ttcgtggctcccaacaccttatttgccaacgggtccgtctacccgcccaatgagggcttc
tgcccgtgccgggagtctggaattcagaatgtcagtgcctgcaggttcaacgcaccctta
tttctctcccatcctcacttctacaacgctgacccagtcctggcagaggcagtgtctggc
ctccaccctaacccagaagagcactccttgttcctggacatccacccggtcaccggaatc
cccatgaactgctctgtgaaactgcagctgagcctctacattaagtctgtgaaaggcatc
ggacaaactgggaagatcgagccggtgatcctgccactgatgtggtttggagaggtaagg
ctcggggcaatggagggtgagacccttcagacgttctacagccagctggtgttgatgccc
aaggtgctgcattatgcccagtacgtgctccttgccctgggctgcgtcctgctgctcatc
cccatcgtctaccaaatccggagccaagagaagtgctatttattttggagtagtagtaaa
aagggctcaaaggataaggaggccattcaggcctattctgaatccctgatgacatcagct
cccaaggggactgtactgcaagaagcaagactgtag
DBGET
integrated database retrieval system
