Phocoena phocoena (harbor porpoise): 136133537
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Entry
136133537 CDS
T11058
Symbol
LMNA
Name
(RefSeq) lamin isoform X1
KO
K12641
lamin A/C
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04210
Apoptosis
pphc04820
Cytoskeleton in muscle cells
pphc05410
Hypertrophic cardiomyopathy
pphc05412
Arrhythmogenic right ventricular cardiomyopathy
pphc05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
136133537 (LMNA)
09142 Cell motility
04820 Cytoskeleton in muscle cells
136133537 (LMNA)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
136133537 (LMNA)
05412 Arrhythmogenic right ventricular cardiomyopathy
136133537 (LMNA)
05414 Dilated cardiomyopathy
136133537 (LMNA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136133537 (LMNA)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
136133537 (LMNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
TPR_MLP1_2
HAUS-augmin3
TolA_bind_tri
ACBP4_C
CENP-F_leu_zip
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
136133537
NCBI-ProteinID:
XP_065746875
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All DBs
Position
1:113434325..113453024
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AA seq
676 aa
AA seq
DB search
METPSQRRATRGGAQGSSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLR
LRITESEEVVSREVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKDLKARN
TKKEGDLMAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKLEAALSEAK
KQLQDEMLRRVDAENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREFESR
LADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLMGAAHEELQQSRVRID
SLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQ
ELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRASSHSSQTQSGGSITKKRK
LESTESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLT
YRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAM
RKLVRSVTMVEDDEDEDGDDLLHHHHGSHGSSSGDPAEYNLRSRTVLCGTCGQPADKASA
SSSAAQVGGSISSGSSASSVAVTRSYRGVGGSGGGSFGDSLVTRSYLLGNSRLRTQSPQN
CSIIQEMGMRWEVEGG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgtcccagcggcgcgccacccgcggtggggcgcagggcagctccaccccg
ctgtcgcccacccgcatcacccggctgcaggagaaggaggacctgcaggagctcaatgac
cgcttggcggtctacatcgaccgtgtgcgctcgctggagacggagaacgcaggtctgcgc
cttcgcatcaccgagtccgaggaggtggtcagccgcgaggtgtccggcatcaaggccgcc
tacgaggcagagctcggggatgcccgcaagaccctcgactcggtggccaaggagcgcgcc
cgcctgcagctggagctgagcaaagtgcgcgaggagttcaaggacctcaaggcacgcaat
accaagaaggagggagacttgatggctgcccaggcccggctcaaggacctggaggctctg
ctcaactccaaggaggccgcactgagcactgctctcagtgagaaacgcacgctggagggc
gagctgcatgacctgcgggggcaagtggccaagctcgaggcagccctgagtgaggccaag
aagcaacttcaggatgagatgctgcggcgggtagatgctgagaacaggctgcagaccctg
aaggaggagctggacttccagaagaacatctacagcgaggagcttcgtgagaccaagcgc
cgccatgagacgcgactggtggagattgataatgggaagcagcgtgagtttgagagccgg
ctggcggatgccctgcaggagctgcgggcccagcacgaggaccaggtggaacagtacaag
aaggaactggagaagacctattctgccaagctggataatgccaggcagtcagccgagagg
aacagcaacctgatgggggccgcccacgaggagctgcagcagtcccgcgtccgcatcgac
agcctctctgcccagctcagccagctccagaagcagctggcagccaaggaagcaaagctg
agggacctggaggactcgctggcccgtgagcgggacaccagccggcggctgctggcagac
aaggagcgggagatggcggaaatgcgggcaaggatgcaacagcagctggacgagtaccag
gagctgctggacatcaagctggccctggacatggagatccacgcctaccgcaagctcctg
gagggcgaggaggagaggctacgcctttcccccagccccacctcacagcgcagccgcggc
cgggcctcctcccactcgtcccagacacagagtgggggcagcatcaccaaaaagcgcaag
ctggagtccacagagagccgcagcagcttctcccagcacgctcgcaccagcgggcgcgtg
gccgtggaggaggtggacgaggagggcaagttcgtacgcctgcgcaacaagtcaaatgag
gaccagtccatgggcaactggcagatcaagcgccagaatggagatgatcccctactgacc
taccgcttcccgccaaagttcactctgaaggctggtcaggtggtgacgatctgggctgca
ggagctggggccacccacagcccccctaccgacttggtgtggaaggcacagaacacctgg
ggctgtggaaacagcctgcgcacggctctcatcaactccactggggaagaggtggccatg
cgcaagctggtgcgctcagtgactatggttgaggatgacgaagatgaggatggagatgac
ctgctccatcaccaccacggctcccacggcagcagctcgggggaccccgccgagtacaac
ctgcgctcgcgcaccgtgctgtgcgggacgtgcgggcagcctgcagacaaggcgtctgcc
agcagctcggcagcccaggtgggcggatccatctcctctggctcctccgcctccagtgtc
gcagtcactcgcagctaccgcggtgtggggggcagtgggggtggcagcttcggggacagc
ctggtcacccgctcctacctcctgggcaactccagactccgaacccagagcccccagaac
tgcagcatcatacaagagatgggaatgaggtgggaggtagaaggagggtga
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