Phocoena phocoena (harbor porpoise): 136133653
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Entry
136133653 CDS
T11058
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04517
IgSF CAM signaling
pphc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136133653 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136133653 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136133653 (SPTBN1)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
136133653 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
136133653 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
136133653
NCBI-ProteinID:
XP_065746964
LinkDB
All DBs
Position
14:complement(44952395..45148503)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVVRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEAGACELWIDEKEQWLDNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
RAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMALLEPLNERKQNLLASREIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKAEDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEPSSKVSEETESQQQWDASKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRTSS
KESSPIPSPTSERKAKTALPAQSAATLPARTQETPLAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacatcgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggacgactgggacaacgagaacagctccgcgcggctcttc
gagcggtcccgcatcaaggctctggcagatgaacgtgaagccgtgcagaagaagaccttc
accaagtgggtcaactcccacctcgcccgggtgtcctgccggatcacagacctgtacact
gacctccgggatggacggatgctcatcaagctgctggaggtcctctccggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaacgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
gggaaccaccggctgacccttggccttatctggaccatcatcctgcgcttccagatccag
gatatcagcgtggaaactgaagacaacaaagagaagaaatctgccaaggatgccttgctg
ttgtggtgccagatgaagacagctgggtatcccaacgtcaacattcacaatttcaccact
agctggagggacggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgacaagctaaagaaatccaatgcacactacaatctgcagaatgcatttaacctt
gcagagcagcacctcggcctcactaaactgttggaccccgaagatatcagtgtggaccac
cccgatgagaagtccattatcacttatgtggtgacttattaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgctcgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcccttgcctctgaccttctggagtggattgaacaa
accatcattattttgaacaaccgcaaatttgccaactcgctggttggggttcaacaacag
cttcaggccttcaacacctaccgcactgtggagaagccgcccaaatttactgagaagggg
aacttggaagtcctgcttttcactattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcggaacgagctcataagacaggagaaactg
gaacagctcgcccgcagatttgaccgcaaggcagctatgagggagacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcccgcagtcgaggctgcc
acgaaaaagcacgaggccattgagacggacattgccgcgtacgaggagcgcgtgcaggcc
gtggtggccgtggccagggagctggaagcagagaactaccacgacatcaagcgcatcgcg
gcgaggaaggacaacgtcatccggctctgggagtacctgctggagctgctcagggcccgg
cggcagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgggtgagaggtgtcaatgcctccgcccagaagtttgcaacagacggggaaggt
tacaagccctgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgttat
caagagctttgccagctggcggccgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggccgaggaggaaggctggatccgggagaaggagaagatc
ctgtcctccgacgactatggcaaggacctcaccagcgtcgtgcggctgctcagcaagcac
cgggcgttcgaggacgagatgagcggccgcagcggccacttcgagcaggccatcaaggag
ggcgaagacatgatcgccgaggagcacttcgggtcggagaagatccgggagcggatcgcc
tacattcgtgagcagtgggcccacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcgtcgctgctgcatcagttccaggcggacgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcaacgacgtgggccacgacgagtactccacccag
tccctggtcaagaagcacaaggacgtggcagaggagatcgccaactaccggcccaccatc
gactcactgcacgagcaggccggcgccctcccccaggagcatgccgagtcccccgacgtg
cagggccgactggcgggcatcgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggccggcgcc
tgcgagctctggatcgacgagaaggagcagtggctcgacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagattcgagagcctagagccagaaatgaacaac
caggcttcccgggtggcggtggtgaaccagatcgctcggcagctgatgcacagcggccac
ccgagtgagaaggagatcaaggcccagcaggacaagctcaacacgaggtggagtcagttc
agggagctggtggaccggaagaaggacgctctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcctggattcgggaaaagaccaaggtcattgaatcc
acccaggacctgggcaacgacctggcaggagtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaggaggccgag
aagctggaatccgagcaccctgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccacgctgaagaaccgcgaggcctccttgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acccagacggccatcgcctcggaggacatgcccaacaccctgaccgaggctgagaagctc
ctcacgcagcacgagaacatcaaaaacgagatcgacaactatgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagaccgacgcccagtacatgttcttg
cggcagcggctgcaggccctggacactgggtggaatgagctccacaagatgtgggagaac
aggcagaaccttctctcccagtcccacgcctaccagcagttcctgcgggacacgaagcag
gccgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggacgcc
aacgaggagaagatcaatgcggtcgtggagacgggccggaggctggtgagcgatgggaac
atcagttcggaccgcatccaggagaaggtggactctatcgatgacagacacaggaagaat
cgtgaggcagccagtgagcttctcatgagactgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgatgaagccagaaatcttcacagtaaatggttaaaacatcaagcctttatg
gcagaactcgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagccagagacggaagccgtggtgaaggagaaactcacaggtttacataaa
atgtgggaagtccttgagtctaccacacagaccaaggcccagcggctcttcgacgcaaac
agagctgaactcttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcaatctgacgactacggcaaagacctcaccagtgtcaacatcctgctgaaa
aagcaacagatgctggagaatcagatggaggtgcggaagaaggagatcgaagagctccag
agccaggcgcaggccctgagccaggaggggaagagcacggacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggcgctactggagcccctgaacgagaggaagcagaac
ctgctggcctccagagagatccatcagttcaacagggacgtggaggacgagatcttgtgg
gttggagagaggatgcctttggcaacttccacggatcacggccacaacctccagaccgtg
cagctgttaataaagaaaaatcagaccctgcagaaggagatccagggccaccagccccgc
atcgacgacatctttgagaggagccagaacatcgtcacggacagcagcctcaacgccgag
gccatccggcagaggctggccgacctgaagcagctgtggggcctcctcatcgaggagacg
gagaagcggcaccggcggctggaggaggcgcacaaggcccagcagtactacttcgacgcg
gccgaggccgaggcgtggatgagcgagcaggagctgtacatgatgtccgaggagaaggcc
aaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagccgtg
gaggactacgcagagacggtgcatcagctctccaagaccagccgggccctggtggccgac
aaccatccagaaagtgagcgcatcagcatgcggcagtccaaggtggacaagctgtatgcg
ggcctcaaggacctggccgaggagaggaggggcaagctggacgagaggcaccggctgttc
cagctcaaccgggaggtcgacgacctggagcagtggatcgccgagagggaggtggtcgca
gggtcgcacgagctggggcaggactacgagcacgtcacgatgctacaagaacgattccgg
gaattcgcccgggacacagggaacattgggcaggagcgcgtggacacggtcaatcacatg
gcagatgaactcatcaactctggacactcggatgccgccaccatcgccgagtggaaggac
gggctcaacgaagcctgggctgacctcctggagctcatcgacacgaggacgcagatcctc
gccgcctcctatgaactgcacaagttttaccatgatgccaaggagatctttgggcgcatc
caggacaagcacaagaaactccccgaggagctcgggagagatcagaacacagtggagacc
ttacagagaatgcacaccacgtttgagcacgacatccaggctctgggcactcaggtgaga
cagctgcaggaggatgcagcccgcctccaggccgcctatgcgggcgacaaggccgaggac
atccagaagcgggagaacgaggtcctggaagcctggaaggccctgctggacgcctgcgag
ggccgcagggtgcggctggtggacacgggggacaagttccgcttcttcagcatggtgcgc
gacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaagccacgg
gatgtgtcctctgttgaactattaatgaataatcatcaaggtatcaaagcagaaatcgat
gctcgtaatgacagtttcacgacctgcattgaacttgggaaatcgctgctggcgaggaag
cactacgcatcagaggagatcaaggagaagttactgcagttgacggaaaagaggaaagaa
atgattgacaagtgggaagaccgatgggaatggttaagactgatcttggaggtccatcag
ttctcaagggacgccagtgtggccgaggcctggctgctcggacaggagccctacctgtcc
agccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccacgaggct
tttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctgacgaca
ctggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccgcct
tctcctgagccgagctcgaaggtttccgaggagaccgagtcccagcagcagtgggatgct
tcaaaaggagagcaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaaacggtggacacgagcgaaatggtcaatggcgctgcagaacagaggacaagctcg
aaagagtccagccccatcccctctcccacctccgagcgcaaagccaagactgccctcccg
gcccagagtgctgccaccttgccggccaggacccaggagacgcctttggcccagatggaa
ggcttcctgaatcggaagcacgagtgggaggcccacaataagaaggcctcaagcaggtcc
tggcacaatgtttactgtgtcataaataaccaagaaatgggtttctacaaagatgcaaag
acagctgcttccggaattccctaccacagcgaggtccctgtgagtttgaaagaagccatc
tgtgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctaagactaaatgac
ggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacatggatccaggcc
atctcctctgccatctcctccgataaacacgaggtgtccgccagcacccagagcacgcca
gcatccagccgggctcagaccttgcccaccagcgttgtcaccatcaccagcgagtccagt
cccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
