Phocoena phocoena (harbor porpoise): 136133770
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Entry
136133770 CDS
T11058
Symbol
GTF3C2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136133770 (GTF3C2)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
136133770 (GTF3C2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
ASA1
DSE1_N
WDR55
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
DUF6908
Motif
Other DBs
NCBI-GeneID:
136133770
NCBI-ProteinID:
XP_065747189
LinkDB
All DBs
Position
14:68866884..68880130
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AA seq
911 aa
AA seq
DB search
MEPYGVGCVALEEAGPVGNMTVVDSPGQEVLKQLDVKASSETTSVEASIETSLSTPLPGF
EDSLDERRLPPEQETLSRLEQQDLSSEMSKVPKPRASKPGPKRGGRTRKGPKRPQQPNSP
SAPRVPGLLDQSNPLSTPMPKKRGRKSKADLLLLKLSKGLDQPESPHPKRPPEDFETPPG
ERPRRRAAQVALLYLQELAEELSTALPAPVSCPESPKVSSPTKPKKSQQQAACHYGEEED
DTARDEDFVLQVEAEDGEESEAPSESSSDPEPTVPRSTARASTSGKQKPHCRGVAPNGLP
NHIMAPVWKCLHLTKDLREQKHSYWEFAEWIPLAWKWQLLSELEAAHYLPQEEKSPLFSV
QREGLPEDGTLYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGAAASQYVALFSS
PDMNETHPLSQLYSGPGLLQLWDLGTLQQESCPGNRAHFVYGIACDHGCIWDLKFCPSGA
WELPGTPRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPLDAVKPAIYKVQCVAT
LQVGSMQASDPSECGQCLSLAWIPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGS
LKLYPFQCFLAHDQAVRTLQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINSIKRFLSTE
LAWLLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTI
AAGDISGELIAAILPDMALNPINVKRPVDRRFPIYKADLMPYQDSPEGQDHSSASSGAPN
PPKARTYAETVNHHYLLFQDTDLSSFHGLPHREPMLRMQEGEGQTRLCLDRLQLEAIHKV
RFSPNLDSYGWLVSGGQSGLVRIHFVRALTCPLGHRMQLESRAHFNAMFQPASPTKGPGF
PPTSHRLLPGP
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagccctacggggtcggctgtgttgctctggaggaggccggccccgtggggaacatg
actgtggtagactctcctggacaagaggtgctaaaacagcttgatgtcaaggcctcttca
gaaacaaccagtgtggaggcttccatagagacatcattatctacccctttgcctggattt
gaggattctcttgatgagaggaggctccctccagaacaggaaaccctctccagactggaa
cagcaagatctttcttcagagatgtcaaaggtcccaaagcctagggcctcaaagcctggc
ccgaagagaggtggtaggacacggaaaggccccaaaaggccccagcagcctaattctcca
tcagcccctcgggttcctggtctcttagatcagtccaaccctctgtccacccccatgcct
aagaaacgaggtcgaaagtccaaggcagatctgctactgctgaagttgtcaaaaggccta
gatcagccagagtctccacatccaaagaggccccctgaggactttgagacccctcctggg
gaacgaccccgccgaagggctgcccaagtggcacttctgtaccttcaggaactggctgaa
gagctctcaactgccctgcctgctccagtgtcctgtcctgagagccccaaggtgagcagc
cccaccaaacccaagaagagccagcagcaggcagcctgtcattatggagaagaagaggat
gacactgcacgggacgaagacttcgttctccaggttgaggctgaagatggagaagaaagt
gaggccccaagcgagagctcgtctgaccctgagcctacagtgccccgaagcaccgcacga
gcatccacttcagggaagcagaagccacactgccggggagtggctcccaatggtttacca
aatcacatcatggctcctgtttggaagtgccttcatctcaccaaggacctccgagaacag
aagcattcatactgggagtttgcggaatggattcctttagcctggaagtggcaattgtta
tctgaacttgaggcagctcactacctgccccaggaggagaagtcgccactgttttctgta
caacgtgaaggacttcctgaagatggcacactctaccgaataaacagatttagctctatc
acagcacacccagagcgctgggatgtgtctttctttacggggggaccgctctgggctctg
gactggtgcccagtgccagagggggcagcagcctcgcagtatgtggctcttttctccagc
cctgacatgaatgagacacacccactgagccagctttattcgggccctgggctgctccag
ctctgggaccttgggaccttgcagcaagaaagctgtcctggcaacagagcccactttgtc
tatgggattgcttgtgaccacggctgcatctgggacctcaagttctgccccagtggagcg
tgggaacttccaggcacccctcggaaggctcctctcttgccccggttgggtctcctggct
cttgcctgctcagatgggaaggtgctgctgttcagtctgccccatcccgaggccctgctg
gctcagcagcccctagatgcagtgaagcctgccatctataaggtccaatgtgtggcaacc
cttcaggtggggtctatgcaagcatcagacccctctgagtgtggtcagtgccttagcctg
gcttggatacccacccggccccaccaccacctggctgctggatattataatggcatggtg
gttttctggaaccttcccacgaactcgcctctgcagcggatacggctctctgatggctcc
ttgaagctctaccccttccagtgtttcctagcccatgaccaggctgtgcgtacccttcaa
tggtgcaaagctaacagtcatttcctagtctctgcagggagtgaccggaaaatcaaattc
tgggaccttcgacgaccttatgaaccaataaactctatcaagcgcttcttgagtacagag
ctggcctggctgctcccttacaatggtgtcactgtggctcaggacaactgctatgcctct
tatggactctgtggaattcattatattgatgctggttaccttggtttcaaggcctacttc
actgctcctcgaaaaggcactgtctggagtctttcaggatccgactggctcgggacaata
gctgcaggagatatatctggggagctcattgcagctatattgcctgatatggcactgaac
ccaataaatgtcaaacgacctgtagatcgaagattccctatatataaagcagatctgatg
ccatatcaggacagtcctgaaggtcaggaccactcttctgcttcatctggggcccccaac
cctcccaaggctcgaacttacgctgaaaccgtcaaccatcactacttgctctttcaagac
acagatttgagttcattccacggtctgccccacagagagccaatgctgcgcatgcaggag
ggagaggggcaaacacggctctgcctggaccggctgcagctggaagctattcataaggta
cgattcagcccaaacctggactcctatggatggctggtctctggggggcagtcagggcta
gttcggatccattttgtccgtgcgctcacctgtccactgggccaccgtatgcagcttgaa
agccgagcccacttcaatgctatgttccagccggcctcccccactaaagggcctggcttc
cctccaaccagccatcgccttctgcctggtccctag
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