Phocoena phocoena (harbor porpoise): 136133838
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Entry
136133838 CDS
T11058
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136133838 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136133838 (WDR43)
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136133838 (WDR43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_SPT8
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
UTP15_C
Beta-prop_NOL10_N
WD40_like
Utp21
DUF6235
Flavi_capsid
Tricorn_2nd
Raftlin
Motif
Other DBs
NCBI-GeneID:
136133838
NCBI-ProteinID:
XP_065747293
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All DBs
Position
14:complement(67440333..67490477)
Genome browser
AA seq
678 aa
AA seq
DB search
MAAGGGGVADPFSPAGIPCAFSPQSQAYFALASTDGHLRVWETASNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKEGPQRKKRKSEAIGTSNQVDLLALGTAVGSILLYSTVKGELHSKL
ISGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPVPILAAGFCSDKMSLLLVYGNWFQPTIE
RVALNSKEPHMCLVRDISICWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QTEEIESKRKLGEKEVSIEERLGALDIDAKKEKDTLPQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIKRTVLRMPLHTVIPLLQELTKRLQGHPNSAVIMVQWLKCVLTIHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGPTCPAQKAKLVYE
EESSEDESDDELGDKDSDDNWDEDEEEKGGEKDEDVDEEEEEDAEEKDEENGEDRDVASE
KELNGDSDLDPENESEEE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggcggaggtgttgcggaccccttctcccccgcggggatcccctgcgcc
ttctccccgcaaagccaggcctatttcgctttagcgtctacagacggtcacctgagagtg
tgggagacagccagcaaccggctgcaccaggagtacgtgccttccgcccacctcagcggt
acctgcacctgcctggcctgggcgccagcgcggctgcaggccaaggaaggtccacagagg
aaaaaaaggaaatcagaagctatagggacaagtaaccaggttgacttgttggctcttggt
acagcagttggtagtattttattatacagtacagtaaaaggagaattacacagtaaattg
ataagtggtggacatgacaacaaagtcaactgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgacaaacatattgtggaatggaacacacagacgtgcaaagta
aagtgcaaatggaaaggtgataatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacgggacatgcaacgccggtttcatcacttatgttcacaactatcaga
cctcctaatgagagccaaccctttgatggaattacaggtctttatttcttatctggagca
gtacatgaccggttacttaatgtctggcaggtccgttcagaaaacaaagagaagaatgca
gtgatgtcttttacagttacagacgaacctgtctatattgacttgactttgtcagaaaat
aaagaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaa
cacatattaaatggatactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acgcctgggaaaggcaagaaatcaacaccaaaacccgtccctattctagcagctggtttt
tgctccgacaaaatgtcattgttgcttgtatatggcaattggtttcagcccaccattgag
cgagtggctttaaattccaaagaacctcatatgtgtttagtaagagatatttcaatctgc
tgggccccaaaagtagaaacagctataacaaaggtgagaacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcatgcagctatcaagcctgctcctcca
cagactgaggaaatagagagcaagaggaaattaggggaaaaggaggttagcattgaagaa
cgcctgggagcactggatatagatgcgaaaaaagaaaaggacacccttccacagacaaac
agttttccagttctcctcacacagggtttagaaagtaatgattttgaaatgctaaataaa
gtacttcaaactaggaacttaaacctaataaagagaactgtactaaggatgcccctgcat
actgtcattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
gttataatggttcagtggctaaaatgcgtgttaacgatccatgcctcctacttatccaca
ttgcctgacctggtaccccagctggggacactgtaccagttaatggaaagcagagtaaaa
acttttcagaaactctctcaccttcacggaaagctcatccttctaatcacgcaagttaca
gcatcagaaaaaacgaagggaccgacttgtcctgcacagaaggcaaagttggtgtatgaa
gaagaatcttctgaagacgagtctgatgatgaactaggagataaggattctgatgataat
tgggatgaagatgaggaagagaaaggaggtgaaaaagatgaggatgttgatgaagaggaa
gaagaggatgctgaagaaaaagatgaagaaaatggtgaggacagagacgtggcaagtgaa
aaggaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaagaatga
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