KEGG   Phocoena phocoena (harbor porpoise): 136133838
Entry
136133838         CDS       T11058                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    136133838 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pphc03009]
    136133838 (WDR43)
Ribosome biogenesis [BR:pphc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    136133838 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_SPT8 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 DSE1_N Beta-prop_IFT140_1st Beta-prop_WDR75_1st UTP15_C Beta-prop_NOL10_N WD40_like Utp21 DUF6235 Flavi_capsid Tricorn_2nd Raftlin
Other DBs
NCBI-GeneID: 136133838
NCBI-ProteinID: XP_065747293
LinkDB
Position
14:complement(67440333..67490477)
AA seq 678 aa
MAAGGGGVADPFSPAGIPCAFSPQSQAYFALASTDGHLRVWETASNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKEGPQRKKRKSEAIGTSNQVDLLALGTAVGSILLYSTVKGELHSKL
ISGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPVPILAAGFCSDKMSLLLVYGNWFQPTIE
RVALNSKEPHMCLVRDISICWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QTEEIESKRKLGEKEVSIEERLGALDIDAKKEKDTLPQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIKRTVLRMPLHTVIPLLQELTKRLQGHPNSAVIMVQWLKCVLTIHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGPTCPAQKAKLVYE
EESSEDESDDELGDKDSDDNWDEDEEEKGGEKDEDVDEEEEEDAEEKDEENGEDRDVASE
KELNGDSDLDPENESEEE
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcggaggtgttgcggaccccttctcccccgcggggatcccctgcgcc
ttctccccgcaaagccaggcctatttcgctttagcgtctacagacggtcacctgagagtg
tgggagacagccagcaaccggctgcaccaggagtacgtgccttccgcccacctcagcggt
acctgcacctgcctggcctgggcgccagcgcggctgcaggccaaggaaggtccacagagg
aaaaaaaggaaatcagaagctatagggacaagtaaccaggttgacttgttggctcttggt
acagcagttggtagtattttattatacagtacagtaaaaggagaattacacagtaaattg
ataagtggtggacatgacaacaaagtcaactgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgacaaacatattgtggaatggaacacacagacgtgcaaagta
aagtgcaaatggaaaggtgataatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacgggacatgcaacgccggtttcatcacttatgttcacaactatcaga
cctcctaatgagagccaaccctttgatggaattacaggtctttatttcttatctggagca
gtacatgaccggttacttaatgtctggcaggtccgttcagaaaacaaagagaagaatgca
gtgatgtcttttacagttacagacgaacctgtctatattgacttgactttgtcagaaaat
aaagaagagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaa
cacatattaaatggatactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acgcctgggaaaggcaagaaatcaacaccaaaacccgtccctattctagcagctggtttt
tgctccgacaaaatgtcattgttgcttgtatatggcaattggtttcagcccaccattgag
cgagtggctttaaattccaaagaacctcatatgtgtttagtaagagatatttcaatctgc
tgggccccaaaagtagaaacagctataacaaaggtgagaacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcatgcagctatcaagcctgctcctcca
cagactgaggaaatagagagcaagaggaaattaggggaaaaggaggttagcattgaagaa
cgcctgggagcactggatatagatgcgaaaaaagaaaaggacacccttccacagacaaac
agttttccagttctcctcacacagggtttagaaagtaatgattttgaaatgctaaataaa
gtacttcaaactaggaacttaaacctaataaagagaactgtactaaggatgcccctgcat
actgtcattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
gttataatggttcagtggctaaaatgcgtgttaacgatccatgcctcctacttatccaca
ttgcctgacctggtaccccagctggggacactgtaccagttaatggaaagcagagtaaaa
acttttcagaaactctctcaccttcacggaaagctcatccttctaatcacgcaagttaca
gcatcagaaaaaacgaagggaccgacttgtcctgcacagaaggcaaagttggtgtatgaa
gaagaatcttctgaagacgagtctgatgatgaactaggagataaggattctgatgataat
tgggatgaagatgaggaagagaaaggaggtgaaaaagatgaggatgttgatgaagaggaa
gaagaggatgctgaagaaaaagatgaagaaaatggtgaggacagagacgtggcaagtgaa
aaggaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaagaatga

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