Phocoena phocoena (harbor porpoise): 136133930
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Entry
136133930 CDS
T11058
Symbol
SLAMF1
Name
(RefSeq) signaling lymphocytic activation molecule
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pphc04517
IgSF CAM signaling
pphc05162
Measles
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
136133930 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136133930 (SLAMF1)
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
136133930 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136133930 (SLAMF1)
04090 CD molecules [BR:
pphc04090
]
136133930 (SLAMF1)
Cell adhesion molecules [BR:
pphc04515
]
Immunoglobulin superfamily
SLAM/CD2 family
136133930 (SLAMF1)
CD molecules [BR:
pphc04090
]
Proteins
136133930 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
ig
V-set
Syndecan
Motif
Other DBs
NCBI-GeneID:
136133930
NCBI-ProteinID:
XP_065747433
LinkDB
All DBs
Position
1:complement(116812257..116843236)
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AA seq
339 aa
AA seq
DB search
MDPKGLLSLNVLLFFSLAFELSCRTGEGSTNCPVMILGRLGSSVLLPLTSDGISKSMNKS
IHILVTMAESPGDTTKKKIVSLDLRKGDSPRHLENGYEFHPENLSLRILKSRKEDEGWYF
MSLEENISVQHFCLQLKLYEQVSTPEIKVLNSSQENGNCSLILACMVEKGDHVAYNWSEE
AGAPLLSPTKNSHLLYLTLGPQDANNIYVCTVSNPISNGSQTFIPWSRCSLGSSESRQWA
LCAGLFLGVIVGVIMILQVVILLLRRRGKTDNYQPTMEAKSLTIYAQVQKSGSVQKKPDS
LPAQDPCTTIYVAATEPVPEPVQESSSITVYASVTLPES
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaggggctcctctccttgaacgtcctgctgtttttctccctagcttttgag
ctgagctgcagaacaggtgagggctcaacgaattgcccagtgatgatccttgggcggctg
ggaagcagtgtgctgctgcccctgacatctgatggaataagtaagagcatgaataagagt
attcacatccttgtcacaatggcagaatcacccggagacaccaccaagaagaaaatagtg
tctctggatctgcggaaaggtgactctccacgccatctggagaatggctatgagtttcat
ccagaaaacctgagcctgaggatcctgaaaagcaggaaggaggacgagggctggtacttt
atgagcctggaggaaaacatttcagtccagcacttttgcctgcagctgaagctctatgag
caggtctccactccggaaattaaggtgttgaattccagccaggagaacgggaactgtagc
ctgatactggcctgcatggtggagaagggggaccatgtagcttacaactggagtgaggag
gcgggcgcccccctgctgagccccaccaagaactcccacctcctgtatctcacccttggc
cctcaggatgccaacaacatctacgtctgcaccgtgagcaaccccatcagcaatggctct
cagaccttcatcccgtggtccagatgcagcctcggttcctcagaatcaagacaatgggca
ctgtgtgctgggctcttcttaggggtcatcgttggtgtcatcatgattctgcaagtagtg
atactactgttgagaagaagaggtaaaacagacaattaccagccaacaatggaagcaaaa
agccttactatctatgcccaagtccagaaatcaggttctgttcagaagaaacctgactct
ctgccagctcaggacccctgcaccaccatttacgttgctgccacagagcctgtgccagag
cctgtccaggaatcaagctccatcacagtatatgccagcgtgacacttccagagagctga
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