KEGG   Phocoena phocoena (harbor porpoise): 136133999
Entry
136133999         CDS       T11058                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04512  ECM-receptor interaction
pphc04514  Cell adhesion molecule (CAM) interaction
pphc04820  Cytoskeleton in muscle cells
pphc05144  Malaria
pphc05205  Proteoglycans in cancer
pphc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    136133999 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    136133999 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    136133999 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    136133999 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    136133999 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    136133999 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pphc04131]
    136133999 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pphc04090]
    136133999 (SDC1)
   00535 Proteoglycans [BR:pphc00535]
    136133999 (SDC1)
Membrane trafficking [BR:pphc04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    136133999 (SDC1)
CD molecules [BR:pphc04090]
 Proteins
  136133999 (SDC1)
Proteoglycans [BR:pphc00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   136133999 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 136133999
NCBI-ProteinID: XP_065747506
LinkDB
Position
14:74961595..74983498
AA seq 310 aa
MRRPALWLWLCALALRLQPALPQTVAVNVPPEDQDGSGDDSDSFSGSGAGALPDLTLSQQ
TPSTWKDKGLLTATPTAPEPSRPDTTVTSTSILPTGEQPEEGGLVLLGELEPGLTAQEKE
ATHPPSGTTLYPTTHRASTARATVAQGPATSHPHRGVQPDHHETSAPTGHGQLEPQAPGV
EDGASATTEKATEDEAPTQLPEGEGSGEQDFTFDVSAENSAGATVEPGQRNVPPGDPGAT
GASQGFLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaggcgcccggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaactgtggctgtaaacgtgccccccgaagatcaggatggctctggagatgac
tccgacagcttctctggctcgggcgcaggcgctctgccagatctcaccttgtcacagcag
accccctccacctggaaggacaaggggctcctgacggccacgcccacggctccagagccc
agccgcccggataccacggtcacctctacctccatcctgccgactggagagcagcctgag
gagggggggctggtgctcctaggagagctggaacctggcctcaccgcccaagagaaggag
gccacccacccacccagtgggaccacgctgtacccaaccacccaccgggcatcgacagcc
agagctaccgtggcccaggggcctgccacctcccatccccacaggggcgtgcagcctgac
caccacgagacctcagctcccacaggtcacggtcagctcgagcctcaggctcccggcgtg
gaggatggagcctctgctaccaccgagaaggctactgaggatgaagcccccacccagctc
ccagaaggagagggctctggcgagcaggacttcacctttgacgtgtcggcggagaactca
gccggggccactgtggaacctggccagcggaatgtgcccccaggggatcccggggccacg
ggggcctcgcagggcttcctggacaggaaggaagtgctgggaggggtcattgccggaggc
ctcgtgggactcatctttgctgtgtgcctggtgggtttcatgctgtaccggatgaagaag
aaggacgagggtagctactccttggaggagccgaagcaagccaatggcggggcctaccag
aagcccagcaaacaggaggagttctacgcctga

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