Phocoena phocoena (harbor porpoise): 136134168
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Entry
136134168 CDS
T11058
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136134168 (SOX11)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136134168 (SOX11)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
136134168
NCBI-ProteinID:
XP_065747713
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Position
14:complement(86400931..86402289)
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AA seq
452 aa
AA seq
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MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSASQSPEKSAAGGGGGAGGGAGGAKTSKGSSKKCGKLKAPTAPAAGGA
KAGAGKAAQPGDYGGAGDDYVLGSLRGSGAGGGGAGKTVKCVFLDEDDEDDEDDDELQLR
IKQEADDEDEEPPHPQLLQPPGQQPPQLLRRYNVAKVPASPTLSSAAESPEGASLYDEVR
AGATAGAGGGSRLYYSFKNITKQHPPPLAQPALSPASSRSVSTSSSSSSSSSSSSSSGSS
SSSSGGEDADDLMFDLSLNFSQSAHSASEQQLGGGAASGNLSLSLVDKDLDSFSEGSLGS
HFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggccgagagcttggaagcggagagcaacctgccccgggaggcgctggac
acggaggagggcgaattcatggcttgcagcccggtggccctggacgagagcgacccggac
tggtgcaaaacggcgtcgggccacatcaagaggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgcaggaagatcatggagcagtctccggacatgcataacgccgagatctcc
aagaggctggggaagcggtggaaaatgctgaaggacagcgagaagatcccgttcatccga
gaggcggagcggctgcggctcaagcacatggccgactaccccgactacaagtaccggccc
cggaaaaagcccaaaatggacccctcggccaagcccagcgccagccagagccccgagaag
agcgcggcgggcggcggcggcggcgcgggcggcggcgcgggcggcgccaagacctccaag
ggctcgagcaagaaatgcggcaagctcaaggcccctacggcccccgcggccggcggcgcc
aaggccggcgcgggcaaggcggcccagcccggggactacggcggcgcgggcgacgactac
gtgctcggcagcctgcgcgggagcggcgcgggcggcggcggcgcgggcaagacggtcaag
tgcgtgttcctggacgaggatgacgaggacgacgaggacgacgacgagctgcagttgcgg
atcaagcaggaggcggacgacgaggacgaggagccgccgcacccgcagctcctgcagccg
cccgggcagcagccgccgcagctgctgagacgctacaacgtcgccaaagtgcccgccagc
cccacgctgagtagcgcggccgagtcccccgagggcgcgagcctctacgacgaggtgcgg
gccggcgcgactgcgggcgccgggggcggcagccgcctctactacagcttcaagaacatc
accaagcagcacccgccgccgctggcgcagcccgcgctgtcgcccgcgtcctcgcgctcc
gtctccacctcctcgtcctcgtcctcgtcctcctcgtccagcagcagcagcggcagcagc
agcagcagcagcggcggcgaggacgccgacgacctgatgttcgacctgagcttgaatttc
tcccagagcgcgcacagcgccagcgagcagcagctggggggcggcgcggcgtccgggaac
ctgtccctgtctctggtggataaggatttggattcgttcagcgagggcagcctgggctcc
cacttcgagttccccgattactgcacgcccgagctgagcgagatgatcgcgggggactgg
ctggaggcgaacttctccgacctggtgttcacgtattga
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