KEGG   Phocoena phocoena (harbor porpoise): 136134460
Entry
136134460         CDS       T11058                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04145  Phagosome
pphc04517  IgSF CAM signaling
pphc04540  Gap junction
pphc04814  Motor proteins
pphc05010  Alzheimer disease
pphc05012  Parkinson disease
pphc05014  Amyotrophic lateral sclerosis
pphc05016  Huntington disease
pphc05020  Prion disease
pphc05022  Pathways of neurodegeneration - multiple diseases
pphc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136134460 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    136134460 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    136134460 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    136134460 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136134460 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    136134460 (TUBB1)
   05012 Parkinson disease
    136134460 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    136134460 (TUBB1)
   05016 Huntington disease
    136134460 (TUBB1)
   05020 Prion disease
    136134460 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    136134460 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pphc03036]
    136134460 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pphc04812]
    136134460 (TUBB1)
   04147 Exosome [BR:pphc04147]
    136134460 (TUBB1)
Chromosome and associated proteins [BR:pphc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     136134460 (TUBB1)
Cytoskeleton proteins [BR:pphc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    136134460 (TUBB1)
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136134460 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   136134460 (TUBB1)
  Exosomal proteins of bladder cancer cells
   136134460 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 136134460
NCBI-ProteinID: XP_065748112
LinkDB
Position
15:83637288..83642129
AA seq 451 aa
MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDWAGSYRGDSALQLERVSVYYNEAHGKKYV
PRAVLVDLEPGTMDSIRSSRLGALFQPDSFVHGNSGAGNNWAKGHYTEGAELVESVLDAV
RAEAEGCDCLQGFQLVHSLGGGTGSGMGTLLLGKIREEYPDRILNSFSVMPSPKVSDTVV
EPYNAVLSVHQLLQNSDACFCIDNEALYDICFRTLRLATPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
AACDPRRGRYLTVACIFRGRMSTKEVDAQLLAVQTRSSGCFVEWIPNNVKVAVCDIPPRG
LSMAATFIGNSTAIQELFSRISEHFSAMFKRKAFVHWYTGEGMDINEFAEAESNIQDLVS
EYQQLQDAEAVPEEKEEVGGEAEREPGDKGH
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagattgtacacattcagatcggccagtgtggcaaccagatcggagctaagttc
tgggaggtgattggcgaggagcatgggatcgactgggccggaagctaccgcggggacagc
gccctgcagctggagagggtcagcgtgtactacaacgaggcccacggtaagaaatacgtg
ccccgagcagtcctggtggacctggaacctgggaccatggacagcatccgatccagccga
ctgggggccctcttccaaccggacagctttgtccacggtaactctggggccggcaacaac
tgggccaagggccactacacggagggggccgagctggtggagagcgtgctggacgcggtg
cgcgccgaggccgagggctgcgactgcctgcagggcttccagctcgtgcactcgctgggc
gggggcacgggctcggggatgggcacgctgctcctgggcaagatccgcgaggagtacccc
gaccgcatcctcaactccttcagcgtgatgccctcgcccaaggtgtcggacacggtggtg
gagccctacaacgccgtgctgtccgtgcaccagctcctgcagaactcggacgcctgcttc
tgcatcgacaacgaggccctctatgacatctgcttccgcaccctccggctggccacgccc
acctacggcgacctcaaccacctggtgtccctgaccatgagcggcgtcaccacgtcgctg
cgcttcccgggccagctcaacgccgacctgcgcaagctggccgtgaacatggtgcccttc
ccgcgcctgcacttcttcatgcccggcttcgcgccgctcacggcccagggcagccagcag
taccgcgcgctctcagtggccgagctcacccagcagatgttcgacgcccgcaacaccatg
gccgcctgcgacccccgccgcggccgctacctgaccgtggcctgcatcttccgggggagg
atgtccaccaaggaggtggacgcgcagctgctcgccgtgcagaccaggagcagtggctgc
ttcgtggagtggatacccaacaacgtcaaggtggccgtgtgcgacatcccgccccggggg
ctgagcatggcggccaccttcattggcaacagcacggccatccaggagctcttcagcagg
atttctgagcacttctcggccatgttcaagaggaaggccttcgtgcactggtacacgggc
gaggggatggacatcaatgagtttgccgaagccgagagtaatatccaggatttggtgtcc
gagtaccaacagcttcaagatgccgaagcagttccggaggagaaggaggaggtcgggggc
gaggcagaaagggaaccaggagataagggacattaa

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