Phocoena phocoena (harbor porpoise): 136134482
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Entry
136134482 CDS
T11058
Symbol
SRSF6
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136134482 (SRSF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136134482 (SRSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136134482 (SRSF6)
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
SR proteins
136134482 (SRSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
136134482
NCBI-ProteinID:
XP_065748151
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All DBs
Position
15:71275877..71279653
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AA seq
345 aa
AA seq
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MPRVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEFRLIVENLSSR
CSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIE
DKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKG
RKSRSKSKSKPKSDRGSRSRSRSRSKDEYEKSRSRSRSRSRSPKENGKGDIKSKSRSRSQ
SRSNSPLPAPPSKARSVSPPPKRASRSRSRSHSKSRSRSRSSSRD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtctacataggacgcctgagctacaacgtccgggagaaggacatccagcgc
tttttcagtggctatggccgccttctcgaaatagaccttaaaaatgggtacggcttcgtg
gagttcgaggactcccgcgacgccgacgacgccgtttacgagctgaacggcaaggagctc
tgcggcgagcgcgtgatcgtggagcacgcccggggcccgcgccgcgatcgtgacggctac
agctacggaagccgcagtggtggaggtggatacagcagtcggagaacctctggcagagac
aaatatggaccacctgtacgcacagaattcaggcttattgtagaaaatctttctagtcgt
tgcagttggcaagatttaaaggatttcatgagacaagcaggtgaagtaacctatgcggat
gctcacaaagaacgcacaaatgaaggcgtcattgagtttcgctcctactctgacatgaag
cgtgctttggataagctggatggtacggaaatcaatgggagaaatattagactaattgaa
gataaaccacgaacaagccacaggcggtcttattctggaagcagatcaaggtcacggtct
agaagaaggtcacgaagtaggagtcgtaggagcagccgcagtagatctcgaagtatctca
aaaagtcgctcccgatccaggtctcggagcaaaggtcgatcacgttctcgttcaaaaggc
aggaaatctagatcaaaaagcaaatctaaacctaagtctgatcgaggctcccgttcgcgc
tctcggagcagatcgaaggatgaatatgagaaatctcgaagcaggtctcgttctcgatct
cgttcccccaaagaaaatgggaaaggtgatataaagtcaaaatccagatcaaggagccag
tctcgttccaattcacccctacctgctccaccctcaaaggcccgttctgtgtcccctcca
ccaaaaagagcttcaagatcccgttctagatctcattcaaagtcaaggtcacgatccaga
tcgagttccagagattaa
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