Phocoena phocoena (harbor porpoise): 136134518
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Entry
136134518 CDS
T11058
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136134518 (RBBP6)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136134518 (RBBP6)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
U-box type E3
136134518 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
136134518
NCBI-ProteinID:
XP_065748223
LinkDB
All DBs
Position
15:complement(19605149..19637354)
Genome browser
AA seq
1796 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPQLPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSTHPAPSISSLTSNQSSLAPPVPGNPSSTPAPVPDITATVSISVH
SEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSER
SQRTQGPSLPANPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREEYSGGQSHRSRNIGGNYPEK
LSSRDSHNQKDNTKSKEKESENVSGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSR
EPTSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSAVSKKETVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNVKSSSSSQKD
EKIIGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDIKSEKLTSKEEKTKKPNDKSKPLD
SKGEKRKRKTEEKGGDKDFESSSMKISKLEVTEIVKPSPKRKMELDIEKLDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSGKVKQEKIKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKAEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDAKSTTQPISSVGKPASVIKNVSTKPSNAVKYTEKENESSEKIQKLTKE
VSHEITQHEVKSSKISASSEKGKTKDRDHSVLEKENQEKRKNSTQPEKDSNLDRLNEQGN
FKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTR
RKDSPSRSKDSAAGQKTKPREERDVPKKGTGDSKKSNSSPSRDKKPHDHKSTYDTKRSSE
EMKSVDKNPCKDREKHVLEAKNNKESSGNKSLYILNPPDPQIEKEQVTGQIDKNTIKPKP
QLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKISKELKDKVMEKAKES
LDMAAVSQVGVTRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKK
KHKKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctttgcgatttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatacgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccagtcaattacatgaagaaacctctaggtccaccacctccatcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaaaaaagaaaaaccaccttttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgaattgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccatgctgtggaaatagttattgt
gatgaatgtataaggacagctctcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgatgtctctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacctccaccccca
ccccaactaccacctccaagaccactcattcaacggaacctacaacctctgatgagatct
ccaatatcaagacaacaagatcctctgatgattccagtgacatcatcaactcacccggct
ccatccatatcttcattaacctctaatcagtcttccttggcccctcctgtgcctggaaat
ccatcttctaccccagcccctgtacctgatataactgcaacggtctccatatcagtccac
tcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgcagcg
cttgcatctgaacattcaaagggagcctcttcaattgcaattactgcccttatggaagag
aagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcattattgcat
ggacaattgatccccacaactggtccagtaagaataaacactgctcgtccaggtggtggt
cgaccaggttgggaacattccaacaagcttggatatctggtttctccaccacagcaaatt
agaagaggggagagaagctgctacagaagtataaaccgtggacgacaccacagcgaaaga
tcacagagaactcaaggcccatcactaccagcaaatccagtttttgtacctgtcccaccc
cctcccttgtatcctcctcctccccacacgcttcctctccctccaggtgttcctcctcca
cagttttctcctcagtttcctcctggccagccaccacctgctgggtatagtgttccccct
ccagggtttcctccagctccggccaatttatcaacaccttgggtgtcatcaggagtacag
acagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaattc
tatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtccaaatctccctatagtggttcatcctattcaagaagttcatatact
tattctaaatcaagatctggttcaacacgatcacgttcttattctcgatcgtttagccgc
tcacattctcgttcctattcacgatcacctccataccccagaagaggcagaggaaagagt
cgaaattaccgttcacggtctagatcgcacgggtatcatcgatctaggtcaaggtcaccc
ccatatagacggtatcattcacgatcaagatctcctcaagcatttaggggacaatctcct
aataaacgtaatgtacctcaaggagaaacagaacgtgaatattttaacaggtacagagaa
gttccaccaccttatgacatgaaagcttattacgggaggagtgttgacttcagagaccca
tttgaaaaagaacgttatcgagaatgggagagaaaatacagagagtggtatgaaaaatat
tataaaggctatgctgctggagcacagcctagaccatcagcaaatagagagaacttttct
ccagagagatttttaccacttaatatcaggaattctcccttcacaagaggccgcagagag
gagtactctggtggacagagtcatagaagtcgaaacataggtggcaactatccagaaaag
ctttcatcaagagacagtcacaatcagaaggataatacaaagtcaaaagagaaggagagt
gaaaatgtttcaggagatggtaaaggaaataaacataagaaacacagaaaaagaagaaag
ggggaagaaagtgaaggctttctaaacccagagttattagaaacttctaggaaatcaaga
gagccaacaagtggtgaagaaaataaaacagactcattgtttgttctcccaagtagagat
gatgctacacctgttagagatgaaccaatggatgctgaatccattacttttaaatcagtg
tctgaaaaagacaagagagaaaaagataaacctaaagcaaaaggtgacaagaccaaacgg
aaaaatgatggatctgctgtgtccaaaaaagaaactgttgcaaaacctgctaaaggacct
caagaaaaactagatggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaa
gccaaagaggagactccaaagactgacaatgtgaaatcatcatcttcctctcaaaaagat
gaaaagatcattggtacccccagaaaagctcactctaagtcagtaaaggaacaccaggag
acaaaaccagtcaaagaggaaaaagtgaagaaggactactccaaagacatcaagtcagag
aagctaactagtaaggaagaaaagaccaagaagcctaatgataagagtaaaccacttgat
agcaagggagaaaaaagaaaaagaaaaactgaagagaaaggtggagataaagattttgag
tcatcttcaatgaaaatctctaaattagaagtaaccgaaatagtgaaaccatcaccaaag
cgcaaaatggaacttgatattgaaaagctggataggacgcctgaaaaagacaaaatttca
tcatcaactgctccagccaaaaaaatcaagcttaacagagaaactggtaaaaaaattgga
agtacagaaaatatatctaatacaaaagaaccctctgaaaaattggagtcaacatctggc
aaagttaaacaagaaaaaatcaaaggaaaggtcaggcgaaaagtgactggaactgaagga
tccagctcaacacttgtggattataccagtaccagttcgactggaggcagtcctgtgcgg
aaagctgaagaaaagacagatacaaagcgaactgtcattaaaacaatggaagaatataat
aatgataacacagctcctgctgaagatgtcattattatgattcaggttcctcaatccaaa
tgggataaagatgactttgaatctgaagaagaagatgctaaatccaccacacagcctata
tcaagtgtaggaaaacctgccagtgttataaaaaatgttagcactaaaccatcaaatgca
gtcaaatatactgaaaaagaaaatgagtcatcagagaaaattcagaaactcaccaaggaa
gtgagccatgaaattacacagcatgaggtcaaaagttcaaaaatctctgcatctagtgaa
aaagggaaaaccaaagatcgagatcattcagtgttggaaaaggaaaaccaagaaaagagg
aagaacagcactcagccagagaaagatagtaatctggaccgtctgaatgagcaaggaaat
tttaaaagtctgtctcagtcttccaaagagactagaacttctggcaaagaagataagcat
gattccattcgaggttcctcaaataaagacttcactcccaacagagacaaaaaaactgat
tatgacaacagagagtattcaagttccaaacgtagagatgaaaggaatgaattaacaaga
agaaaagactctccttctcgcagtaaagactctgcagctggacaaaaaactaagccaagg
gaggagagagatgtgcctaaaaaaggaacaggagattccaaaaaaagtaactctagtccc
tcaagagacaaaaaacctcatgatcataaatccacttatgatactaaacgttcaagtgaa
gagatgaaatctgtagataaaaatccctgtaaagatcgtgagaaacacgtgttagaggca
aagaacaataaagagtcaagtggcaataaatcactgtatatacttaacccaccggaccca
cagattgagaaggagcaagttactgggcaaattgataagaacaccatcaagcctaaaccc
cagttaagtcactcctctcgactgtcctctgacttaactagagaaactgatgaagctgct
tttgaaccagattacaatgaaagtgacagtgaaagcaatgtatctgtaaaagaggaagaa
acttcagggaaaatttctaaggaactgaaagataaagtaatggagaaagcaaaagagagc
ctggacatggcagcagtcagccaggtaggtgtaaccaggagccagagtcaaagcagccct
agtgtcagtccaagtagaagtcatagcccttctggaagccaaacccgaagccacagtagc
agtgctagctctgcagaaagtcaggacagcaagaagaagaagaaaaagaaagaaaagaaa
aagcacaagaaacataaaaaacacaagaagcataagaaacatgcaggcactgaagtagaa
ttggaaaaaagccaaaaacacaaacataagaaaaagaagtcaaagaagagcaaagataaa
gaaaaggagaaggagaaggatgaccaaaaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
