Phocoena phocoena (harbor porpoise): 136134551
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Entry
136134551 CDS
T11058
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04217
Necroptosis
pphc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
136134551 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
136134551 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136134551 (RBCK1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
136134551 (RBCK1)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
136134551 (RBCK1)
Multi subunit type E3
LUBAC complex
136134551 (RBCK1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
IBR
zf-C3HC4_2
zf-RING_5
zf-C3HC4
Zn_ribbon_RanBP
IBR_1
zf-RING_11
zf-C3HC4_4
ubiquitin
Motif
Other DBs
NCBI-GeneID:
136134551
NCBI-ProteinID:
XP_065748272
LinkDB
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Position
15:complement(60589842..60608143)
Genome browser
AA seq
510 aa
AA seq
DB search
MDEKIKKAEEVAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSLTQDIRLWVS
VEDAQLHTATIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVR
RNGASAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVPPKPGGPQE
PGRGQNDAAPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARL
AGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYSVLAPGEAVVLREC
LHTFCRECLQGTIRNSQEAEVACPFIDNTYSCSGKLLEREIRALLSPEDYQRFLDLGISI
AENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHINCLLCKAIHEQMNCKEYQDDLAL
RAQNDVAAWQTTEMLRAMLQQGEAMHCPQCQIVVQKKDGCDWIRCTVCHAEICWVTKGPR
WGPGGPGDTSGGCRCRVNGSPCHPSCQNCH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagatcaagaaagctgaggaggtggcccagagactcacccgagcagtggct
ggcggggatgaacaggtggctatgcagtgtgccatatggctggcagagcaacgggtgccc
ctgaacgtgcaactgaagcctgaggtctccctgacacaggatatcaggctgtgggtgagc
gtggaggatgcgcagttgcacacggccactatctggctcacggtgcggcctgacatgacg
gtggcctccctcaaggacatggtgttcctggactatggctttccgccaaccctgcagcag
tgggtgattgggcagcgcttggcccgggaccaggagaccctgcactcccacggggtgcgg
cggaacggggccagtgcctacctctatctgctgtcagcctgcaacacctcactcaaccct
caggagctgcagcgggagcggcagctgcggatgctggaggatctgggcttcaaggacctc
acgctgcagccacggggccccctggagccagtccctccaaagcctgggggcccccaggag
ccggggcgggggcagaacgacgccgcgccagagcccccgccggtgggctggcagtgccct
ggctgcacgttcatcaacaagcccacgcggcccggctgcgagatgtgctgccgggcgcgg
cccgaggcctaccaggtccccgcctcgtaccagccggacgaggaggagcgagcgcgtctg
gccggtgaggaggaggcgctgcgccagtaccagcagcggaagcagcagcagcaggagggg
aactacctacagcacgtgcaactggatcagcggagcctggtgctgaacaccgagcctacc
gagtgtcccgtatgctactcggtgctggcgcccggcgaggccgtggtgctgcgtgagtgt
ctgcacaccttctgcagggagtgtctacagggcaccatccgcaacagccaggaggccgag
gttgcctgccccttcattgacaacacctactcatgctcgggcaagctgctggagagggag
atccgggcgctcctgagccctgaggattaccagcgatttctggacctgggcatctccatt
gcggaaaaccgcagtgccttcagctaccactgcaagaccccggactgcaaaggatggtgc
ttctttgaggatgacgtcaacgagttcacctgccctgtgtgtttccacatcaactgcctg
ctttgcaaggccatccacgagcagatgaactgcaaggagtaccaagacgacctggccctg
cgggctcagaacgacgtggctgcctggcagacgacggagatgctgagggccatgctgcag
cagggcgaggccatgcactgcccacagtgccagatcgtggtgcagaagaaggacggctgt
gactggatccgctgcactgtctgccacgccgagatctgctgggtcaccaagggtcctcgc
tggggccccgggggcccgggagacaccagcgggggctgccgctgccgggtgaatgggtct
ccttgccaccccagctgtcagaactgccactga
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