Phocoena phocoena (harbor porpoise): 136134581
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Entry
136134581 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136134581
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136134581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136134581
03041 Spliceosome [BR:
pphc03041
]
136134581
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136134581
mRNA cycle factors
Common to processing body (P body) and stress granule
136134581
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136134581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
136134581
NCBI-ProteinID:
XP_065748305
LinkDB
All DBs
Position
15:complement(46596757..46599244)
Genome browser
AA seq
391 aa
AA seq
DB search
MGVECGETSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTNCSR
GFGVVTYATVEEVDAAMKARPHKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKED
TEEHHLXDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKRHTVNGHNC
EVRKALSKQEMAGASSSQRGRSGFGNFGGGRGGGFGGNDNFGHGGNFSGXGGLGGSRGGG
GYGGSGDGYNGVGDDGGYGGGGPGYSGGSRGYGSDGQGYGNQGSGYGGSDSYNNGGGEGG
FGGGSGSNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFATPRNQGGC
GGSSSSSSYGSGRGFDYCQETKLSRRGEPEK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgaatgtggagaaacgtcagagtcacccaaagagcccgaacagctgcggaag
ctcttcataggaggtttgagctttgaaacaaccgatgagagtctgaggagccattttgag
cagtggggaacgctcacagattgtgtggtgatgagggatccaaacaccaattgctccaga
ggcttcggggttgtcacgtatgccactgtggaggaggtggatgcggccatgaaggcaagg
ccacacaaggtgaatggaagagttgtggaaccaaagagggccgtctcaagagaagattct
caaagacctggtgcccacttaactgtgaaaaagatttttgttggtggcattaaagaagac
actgaagaacatcacctannagattattttgaacagtatgggaaaattgaagtgattgaa
atcatgactgatcgaggcagtggcaaaaagagaggctttgctttcgtaacctttgatgac
catgactccgtagacaagattgtcattcagaaacgccacactgtgaatggccacaactgt
gaagtaaggaaagccctatctaagcaagagatggctggtgcttcatccagccagaggggt
cgaagtggttttggaaactttggtggtggtcgtggaggtggttttggtgggaatgacaac
tttggtcatggaggaaacttcagtggttgaggtggcttgggtggcagccgtggtggtggt
ggatatggtggtagtggggatggctataatggagttggtgatgatggtggttatggagga
ggcggccctggttactctggaggaagcagaggctatggaagtgatggacagggttatgga
aaccaaggcagtggctatggcgggagtgacagctataacaacggaggaggcgaaggcggc
tttggcggtggtagtggaagcaattttggaggtggtggaagctacaatgattttggcagt
tacaacaatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagt
tctggcccctatggtggtggaggccaatactttgccacaccccgaaaccaaggtggctgt
ggtggttccagcagcagcagtagctatggcagtggcagaggttttgattactgccaggaa
acaaagcttagcaggagaggagagccagagaagtga
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