Phocoena phocoena (harbor porpoise): 136134698
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Entry
136134698 CDS
T11058
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136134698 (RNPS1)
03015 mRNA surveillance pathway
136134698 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136134698 (RNPS1)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136134698 (RNPS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_ACIN1
RRM_occluded
Nup35_RRM_2
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
136134698
NCBI-ProteinID:
XP_065748445
LinkDB
All DBs
Position
15:36499263..36508149
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AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccttctcctaccaaacgcaaagaccgctctgatgagaagtccaag
gatcgctctaaagataagggggccaccaaggagtcaagcgagaaggatcgtggcagggat
aaaactcgaaagagacgcagcgcttccagtggtagcagcagcaccaggtctcggtccagc
tctacctccagctcaggctccagcaccagcacaggctccagcagcggatccagctcatct
tcagcatcaagccgctcaggaagttccagcacatcccgcagctccagctccagcagctcc
tctggctcaccgagtccttctcggcgcagacatgacaacaggcggcgttcccgctcgaaa
tccaaaccacccaaaagagatgaaaaggaaaggaaaaggcggagcccttcccctaaaccc
accaaagtgcacattggaaggctcaccaggaatgtgaccaaggatcatatcatggagata
ttctccacctatgggaaaattaaaatgattgacatgcctgtagaaaggatgcacccccat
ctgtctaaaggctatgcatatgtggagtttgagaatccagatgaagccgagaaggcgctg
aagcacatggacggaggacaaatcgatggccaggagatcactgccactgctgtgctggcc
ccctggcctcggccaccccccaggcgattcagccctcccaggagaatgctgccaccacct
cccatgtggcgcaggtcacccccacggatgaggagaaggtcacgttcccctcggcgcagg
tcccccgtgcgccggcgatcccgctcccctggccgccgccgccacaggagccgctccagc
tccaactcctcccgataa
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