Phocoena phocoena (harbor porpoise): 136134849
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Entry
136134849 CDS
T11058
Symbol
PAPOLB
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136134849 (PAPOLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136134849 (PAPOLB)
Enzymes [BR:
pphc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
136134849 (PAPOLB)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
136134849 (PAPOLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
136134849
NCBI-ProteinID:
XP_065748672
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All DBs
Position
15:complement(3529259..3531164)
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AA seq
634 aa
AA seq
DB search
MMPFPVTTPGSQQTPPPPKHYGVSSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQ
RRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRSDFFTSFYGKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIAATLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWS
KLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPEENPGGEELRTMWVIGLVLKKPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEM
DMKIAAMHLRRKELHQLLPSHVLQKKKTHSMEGVRWTALDDGSLDLSVGSEGSTSVSSLP
GSMKTGPVTGSTQGRSMPAPAMMAASVTSVQVPEVSLQQANPSDSPGGTSSGSIPQTAPQ
PTISPPPKPMVTRVVSSTPLVSHHPGLQGAQQQT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtttccggtgaccaccccgggatcacaacagaccccgccgccgcccaagcac
tatggcgtctcctcccccatcagtttagcaccccccagggagactgactgcatacttacc
cagaaattaattgaaaccctgaagccctttggggtttttgaagaggaagaggaactacag
cgcaggattttaattttggagaaattaaataacctggtaaaggaatggatacgagaaatc
agtgaaagcaagagtcttccacaagctgtaatagaaaacgttggagggaagatctttaca
ttcggttcttatagattaggggtgcatacgaaaggtgccgatatcgacgcgttgtgcgtg
gcaccaagacatgttgatcgaagcgattttttcacctccttctatggtaaattgaaacta
catgaagaagtaaaggatttaagggctgttgaagaggcatttgtaccagttatcaaactg
tgttttgatgggatagagattgatattttgtttgcaagattagcactgcagactattccg
gaagatttggacctaagagatgacagtctgcttaaaaatttagatattaggtgcataaga
agtcttaatggttgccgggtaactgatgagattttacatctagtaccaaacattgacaac
ttcagattaactctgagagccatcaagttgtgggccaaatgccacaatatctattccaat
atattaggtttcctaggaggtgtttcctgggcgatgctagtagcaagaacttgccagctt
tatccaaacgcgatagcagcaactcttgtacgtaaatttttcttggtgttttctgaatgg
gaatggccaaatccagtgctactgaaagagcctgaagaacggaaccttaatttgcctgtc
tgggacccaagagtaaatcccagcgataggtaccatctcatgcctataattacaccagcg
tacccgcagcagaactccacgtacaacgtgtctgtttcaacaaggatggtcatgattgag
gagtttaagcaagggcttgctatcacgcatgagattttgctgagtaaggcagagtggtcc
aaactttttgaagctcccagcttctttcagaagtacaagcattatattgtacttctagca
agtgcgcccacagaaaaacagcatctagaatgggtgggcctggtggaatcgaaaatccgc
atcctggttggaagcttggagaagaatgaatttattacactggctcacgtgaatcctcag
tcgtttccagcacccgaggagaatcctggcggcgaagaacttcgtacgatgtgggtgatt
gggttagtgttaaaaaagccagagaactctgacattctcagtattgatctcacctatgac
atccagtctttcacagatacagtttacaggcaagcggtaaatagtaagatgtttgagatg
gatatgaaaattgctgcaatgcatttgagaagaaaggaacttcatcaactactacctagt
cacgtgcttcagaaaaagaaaacacactcgatggaaggtgtcagatggacagctttggat
gacggcagcctcgacttgtctgtaggcagtgaaggcagcacgtctgtgtcttcacttcct
ggctctatgaagactggcccagtgactggcagcactcagggcagaagcatgcctgccccg
gctatgatggcagcatctgtgaccagcgtacaggttcctgaagtttccttacaacaagca
aatcccagcgacagcccggggggcacgtccagcggaagcatccctcagactgccccacaa
ccaactatttctccaccgccgaagcccatggtcaccagagttgtttcctcaacacctctg
gtcagccatcacccaggccttcagggagcacagcagcaaacatag
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