Phocoena phocoena (harbor porpoise): 136134860 Help Entry 136134860         CDS       T11058                                  Symbol CPNE1 Name (RefSeq) copine-1 isoform X1   KO K24524   copine 1/2/3 K24526   RNA-binding protein 12 Organism pphc  Phocoena phocoena (harbor porpoise) Brite KEGG Orthology (KO) [BR:pphc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:pphc03041]     136134860 (CPNE1)   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:pphc04990]     136134860 (CPNE1) Spliceosome [BR:pphc03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     136134860 (CPNE1) Domain-containing proteins not elsewhere classified [BR:pphc04990]  Von Willebrand domain-containing proteins   VWA domain-containing proteins    136134860 (CPNE1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Copine RRM_1 C2 vWA-TerF-like VWA Motif Other DBs NCBI-GeneID:  136134860 NCBI-ProteinID:  XP_065748689 LinkDB All DBs Position 15:complement(64375728..64412778) Genome browser AA seq 1462 aa AA seqDB search MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSGRVNLP TTVPNFNNPSPSVVTAATSVHESNKNVQTFSTASIGTAPPNMGASFGSPTFSSTIPSTAS PMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPP MSGMPPLNPPPVAPLPAGMNGSGAPMNLNNNLNPVFLGPLNPVNPIQMNSQSSVKPLPIN PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSIGPSGQTHPPPQALPRSKSPSGQKRS RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN EADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVT SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMPVPGNPAVPGIPSVGMPSA GMPNAGMPNTGMPAAGMPGAGMPGVGIPSAGMPSAGMPSAGGEEHAFLTVGSKEANNGPP FNFPGNFGGSNAFGPPLPPPGLGGAFGDARPGMPSVGNSGLPGLGLDVPGFGGGPNNLSG PGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGSAPGHLSGPPAFGPGPGPGPGPVHVGGPP GFGSSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAF ESRDEATAAVIDLNDRPIGSRKVKLMAHCVTLVQLSISCDHLIDKDISSKSDPLCVLLQD VGGGKWAELGRTERIRNCSSPEFSKTLKLEYHFETVQKLRFGIYDIDNKTPELGDDDFLG GAECSLGQIVSSRILTLPLMLKPGKPAGRGTITVSAQELKDSRVVTMEVEARNLDKKDFL GKSDPFLEFFHQGDGKWHLAYRSEVIKNNLNPTWKRFSVPLQHFCGGDPSTPIQVRCSDY DSDGSHDLIGTFHTSLAQLQAVPAEFECIHLEKQQKKKSYKNSGTICVKICQVETEYSFL DYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLTALWSVGSVVQDYDSDKL FPAFGFGAQVPPDWQVSHEFALNFNPNNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPII NHVARFAAQAAHQRTASQYFVLLLLTDGAVTDVEATREAVVRASFLPMSVIIVGVGGADF EAMEQLDADGGPLRTRSGEAAARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFKA QGWAPLKALPPAAKGPAQVPQA NT seq 4389 nt NT seq  +upstreamnt  +downstreamnt atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc cacttcttctctggattgaccatccctgatgggggcgtgcatattgtagggggtgaactg ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca ggtggtacaattaaagggtcaaaagtaacactattgttgagtagtaaaacggaaatgcag aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatataccaccagca aatgctagtagatcaggacctccacctagttcaggaatgagtggcagggtaaacttgcct acgacagtacccaactttaataatccctcacccagtgtagttactgccgccacttctgtt catgaaagcaacaaaaacgtacagacattttccacagccagcataggaacggctcctcca aatatgggggcctcctttgggagcccaacgtttagctcaaccattccgagcacagcctct ccaatgaacacagtcccacctccaccaattcctccaatcccagcgatgccatctttgccg ccaatgccgtccattcctccaataccagttcctcccccggtacctacattgcctcctgtg cctcctgtgcccccaatacccccagtcccttctgtgccacccatgaccccactgccaccc atgtcaggcatgccacccttgaacccgccacctgtggcacctctacctgctggaatgaat ggctctggagcacctatgaatctgaacaataacctgaaccctgtgttcctgggtccattg aatcctgttaaccctatccagatgaactctcaaagcagtgtgaaaccacttcccatcaac cctgatgatctgtatgtcagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc agagattttttccatgggctccgtgttgatgccgtgcatttgttgaaagatcatgtaggt cgaaataatgggaatggattggttaagtttctctcccctcaagatacatttgaagctttg aagcgaaacagaatgctgatgattcaacgctatgtggaagttagtcctgccacagagaga cagtgggtagctgctggaggccatatcacttttaagcaaagtataggaccttctggacaa acccatccccctcctcaggcacttcccaggtcaaaatcgcccagtgggcagaaaaggtca aggtcaagatcaccacacgaggctggtttttgtgtttacttgaaagggctaccctttgaa gcagaaaacaaacatgtcattgatttttttaaaaagttggatattgtggaagatagtatt tatattgcttatggacccaatgggaaagcaacgggtgaaggcttcgtagagttcaggaat gaggctgactataaggctgctctgtgtcgtcataaacagtacatgggcaatcgctttatt caagttcatccaattaccaagaaaggtatgctagaaaagatagatatgattcgaaaaaga ttgcagaacttcagctatgaccagagggaaatgatgttaaatccggagggggatgtcacc tctgccaaagtctgtgcgcatataacaaatattcccttcagcattaccaagatggatgtt ctccaattcctagaaggaatcccagtggatgaaaatgctgtacatgttcttgttgataac aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact ctagaagatatgagagagattgagaaaaatcctcctgcccaaggaaaaaaggggttaaag atgcctgtgccaggtaatcccgcagttccaggaattcccagtgtgggaatgcccagtgcg ggaatgcccaatgcaggaatgcccaatacaggaatgcctgctgcaggaatgcccggtgct ggaatgcccggtgtgggaatacccagtgcgggaatgcctagtgcgggaatgcctagtgca ggaggtgaagagcatgccttcttgactgtaggatctaaggaggccaacaatgggcctcca tttaactttcctggtaattttggtgggtcaaatgcctttggaccaccactccctcctcca ggattaggaggggcctttggtgatgctaggcctggaatgccttcagttggaaatagtggt ttgcctggtctaggactggatgttccaggttttggaggtggaccaaataatttaagtgga ccaggatttggagggggccctcagaattttggaaatggccctggtagcttaggtggcccc cctggctttggaagcggccctcctggccttggaagtgcccctgggcatttgagtgggcct ccagcctttggccctggccctggcccaggcccaggcccagtccatgttggtggtcctcct ggctttggatctagttctggaaaaccaggaccaacagtaatcaaagtacagaacatgccc ttcactgtgtctattgatgagattttagatttcttttatggctatcaagtgatcccaggc tcagtgtgtttaaaatacaatgaaaaaggtatgcccacaggtgaagctatggtggctttc gaatctcgggatgaagccacagctgctgtcattgacttaaatgacagacctattggctct aggaaagtaaaactcatggcccactgcgtgaccttggttcagctgtccatttcatgtgac cacctcattgacaaggacatcagctccaagtctgacccactctgcgtccttttacaggat gtgggagggggcaaatgggctgagcttggccggactgagcgaatacggaactgttcgagc cctgagttctccaagactctgaagcttgagtaccactttgaaacagtccaaaagctccga tttggcatctatgacatagacaacaagacacctgagctgggggatgatgacttcctagga ggggctgagtgttccctaggacagattgtgtccagtcggatactaactctacccttgatg ctgaagcctggaaaacctgctgggcgagggaccatcacggtctcagctcaggagctaaag gatagtcgtgtagtgaccatggaggtggaggccagaaacctagataagaaggacttcctg ggaaaatcggatccgttcttggagtttttccatcagggtgatgggaaatggcacctggca tacagatctgaggtcatcaagaacaacctgaaccctacttggaagcgcttctctgttccc cttcaacacttctgtgggggagaccccagcacacccatccaggtgcgatgctccgattat gacagtgatggctcacatgacctcattggtaccttccacaccagcttggcccagctgcaa gcagtcccagctgagtttgaatgcatccaccttgagaaacagcagaaaaagaaaagctac aagaactctggaactatctgtgtcaagatttgtcaggtagaaacagaatattcattcttg gactatgtgatgggaggctgtcaaatcaacttcactgtgggtgtggacttcacgggctcc aatggagacccttcctcacctgattccctgcactacctgagcccaacaggggtcaatgag tacctgacagcactgtggagtgtgggcagtgtggttcaggactatgattcggacaagctg ttcccagcatttggatttggggcccaggtaccccctgactggcaggtctcccatgaattt gccttgaacttcaaccctaacaacccctactgtgcaggcatccagggcattgtggatgct taccgccaggccctgccccaagttcggctctatggccctaccaactttgcacccatcatc aaccatgtggctaggtttgcagcccaggctgcacatcagaggacggcctcgcaatacttc gtgctgttgctgctgaccgatggtgctgtgacagatgtggaggccacacgtgaggctgtg gttcgtgcctccttcttgcccatgtcagtgatcatcgtgggtgtgggtggtgctgacttc gaggccatggagcagctggatgctgatggtggacccctgcgtacacgctccggggaggca gctgctcgtgacatagtgcagtttgtgccctaccgccgcttccagaatgcccctcgagag gcactggcgcagactgtacttgcagaagtacccacgcaactggtctcctacttcaaggcc caaggttgggccccactcaaagcacttccacctgcagccaagggccctgcacaggtccct caggcctag

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