Phocoena phocoena (harbor porpoise): 136134918
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Entry
136134918 CDS
T11058
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136134918 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136134918 (TAF6)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136134918 (TAF6)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136134918 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
136134918 (TAF6)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136134918 (TAF6)
STAGA complex
136134918 (TAF6)
TFTC complex
136134918 (TAF6)
SAGA complex
136134918 (TAF6)
SLIK complex
136134918 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
DUF3275
Motif
Other DBs
NCBI-GeneID:
136134918
NCBI-ProteinID:
XP_065748768
LinkDB
All DBs
Position
15:complement(6580570..6585166)
Genome browser
AA seq
668 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEDALKFMHMGKRQKLTTSD
IDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVC
LKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATPADG
KGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMT
CIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPW
TTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRGVLDGLVLSNIDRIGADHVQSLLLKH
CAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPT
LTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASST
QQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATSAPPSTAPSGPGSVQKYIVVS
LPPTGEGKGGPTSHPSPAPPPTSAPSPLGVSALCGGKLEAGESPPPAPGTPKANGSQPPG
CGSPPPAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaagctgaagctgagcaacaccgtgctgccctcggagtccatgaag
gtggtggccgagtccatgggcatcgctcagattcaggaggagacctgccagctgctgaca
gatgaggatgccttgaagttcatgcacatggggaagcggcagaagctcaccaccagtgac
attgactacgcactgaaactaaagaacgtcgagccactgtatggcttccacgctcaggag
ttcattcctttccgtttcgcctctggtggcggccgggagctttacttctacgaggagaag
gaggttgatctgagcgacatcatcaatactcctctgccccgagtgcccctggatgtctgc
ctcaaagctcactggctgagcattgaaggctgccagccagctattccagagaacccaccc
ccagctcccaaagagcagcagaaggctgaggccacagaacccctgaagtccgccaagcca
ggccaggaggaagacggccccttgaaaggcaaagggcagggggccactccagctgacggc
aaagggaaagaaaagaaggcaccacccctgctggagggggcgcctctgcgactgaagccc
cgaagcatccacgagttgtctgtggagcagcagctgtactacaaggagatcacagaagcc
tgtgtgggctcatgtgaggccaagagagcggaggctctgcagagcattgccacggatcca
gggctctaccagatgctgccacgcttcagcaccttcatctcagagggggtgcgcgtgaac
gtggtgcagaacaacctggccctgctcatctacctgatgcgcatggtgaaggcgctgatg
gacaaccctactctgtatctagagaaatacgtgcacgagttgatcccggctgtgatgacc
tgcatcgtgagcagacagctgtgcctgcggccagatgtggacaatcactgggcgctccgg
gactttgccgcccgcctggtggcccagatctgcaagcatttcagcacaaccactaataac
atccagtcccggatcaccaagaccttcaccaagagctgggtggatgagaagaccccgtgg
acaacgcgctacggctccatcgcaggcctggcagagctgggacatgatgtgattaagact
ctgattctgccacggctacagcaggagggggagcggatccgcggggtcctggatggcctt
gtgctgagcaacatcgaccgcataggggctgaccacgtgcagagcctcctcctgaaacac
tgtgcccctgttctggcaaagctgcgcccaccgcctgacaatcaggatgcctatcgggca
gaatttgggtccctcgggcccctcctctgctcccacgttgtcaaggcccgggcccaggct
gctctgcaggctcagcaggtcaacaggaccactctgaccatcactcagccccggcccacg
ctgaccctctcacaggccccccagcctggccctcggacccctggcttgctgaaggtccct
ggctccattgcgctgcctgtccagacactggtgtctgctcgagctgctgccccgcctcag
ccttcccctcccccaaccaagttcattgtcatgtcatcatcctccagcgcctcatccacc
caacaggtcctgtccctcagcacctcggcccctggctcaggctccaccactacctctcct
gtcaccaccaccgtccccagcgtgcagcccatcgtcaagctggtctccaccgccacaagc
gcgccccccagcactgccccctctggtcccgggagtgtccagaagtacatcgtggtctct
cttccccccacaggggagggcaaaggaggccccacctcccatccttctccagcccctccc
ccgacctcagccccctccccgcttggggtcagcgccctatgtggggggaaactggaagct
ggggagagcccccctcccgctccagggactccgaaggctaatggctcacagccccccgga
tgtggctcccctccgcctgcgccttga
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integrated database retrieval system
