Phocoena phocoena (harbor porpoise): 136134947
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Entry
136134947 CDS
T11058
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04060
Cytokine-cytokine receptor interaction
pphc04350
TGF-beta signaling pathway
pphc04390
Hippo signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136134947 (GDF5)
04390 Hippo signaling pathway
136134947 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
136134947 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pphc04052
]
136134947 (GDF5)
Cytokines and neuropeptides [BR:
pphc04052
]
Cytokines
Transforming growth factors (RSTK binding)
136134947 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
136134947
NCBI-ProteinID:
XP_065748809
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Position
15:complement(64217587..64221294)
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AA seq
499 aa
AA seq
DB search
MRLPKVLTFLLWHLAWLDLEFICTVLGAPDLGQRPQGARPGLAKAEAKERPPLAQNIFRP
GGHSYGGGATNARAKGGTGQTGALTQPKKDEPKKLPPRSGGPEPKPGHPPQTRQAATRTV
TPKGQLLGGKAPPKTGSVPSPFLLKKAREPGSPREPKEPFRPPPITPHEYMLSLYRTLSE
ADRKGGNNSVKLEAGLANTITSFIDKGQDDQGPAIRKQRYMFDISALEKDGLLGAELRIL
RKKPSDTAKPVAPSSGRAVQLKLSSCPSGRQPAALLDVRSMPGLDGSGWEVFDIWKLFRN
FKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARS
GQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNPKARCSRKALHVNFKDMGWDDWIIAPL
EYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSA
NNVVYKQYEDMVVESCGCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagactccccaaagtcctcactttcttgctttggcacctggcttggctggacctggaa
ttcatctgcactgtgttgggtgcccctgacttgggccagagaccccagggggccaggcca
ggattggccaaagcagaagccaaggagaggccccctctggcccagaacatcttcaggccg
gggggtcacagctacggtgggggggccaccaatgccagggcaaaggggggcaccgggcag
acaggagccctgacacagcccaagaaggatgaacccaaaaagctgccccccagatcgggt
ggccctgaacccaagccaggacaccctccccagacaaggcaggctgcaacgcggactgtg
accccaaaaggacagcttcttgggggtaaggcaccaccaaagacaggatctgtccccagc
cccttcctgctgaagaaggccagggagcctgggtcccctcgagagcccaaggagccattc
cgcccgcccccaatcacgccccacgaatacatgctctcgctgtacaggacgctgtccgag
gctgacagaaagggaggcaacaacagcgtgaagttggaggctggcctggccaacaccatc
accagctttattgacaaagggcaagatgaccaaggtcctgcgatcaggaagcagaggtac
atgtttgacattagcgccctggagaaggatgggctactaggggccgagctgcggatcttg
cggaagaagccctcggacacagctaagccagtggcccccagcagtgggcgagctgtccag
ctgaagctgtccagctgccccagcggccgacagccagcggccttgctggatgtgcgttcc
atgccaggcctggatggatctggctgggaggtgtttgacatctggaagctcttccgaaac
tttaagaactcggcccagctgtgcctggagctggaggcctgggaacggggccgggctgtg
gacctccgtggcctgggctttgaccgggctgcccggcaggtccatgagaaggccctgttc
ctggtgtttggccgcaccaagaaacgggacctgttctttaatgagattaaggcccgctct
ggccaagatgataagaccgtctacgagtacctgttcagtcagcggcgaaagcggcgggcc
ccactggccacacgtcagggcaagcggcccagcaagaaccccaaggcccgctgcagtcgg
aaggcgctgcatgtcaacttcaaggacatgggctgggacgactggattatcgcgcccctg
gaatacgaggccttccactgcgaggggctatgcgagttccccctgcgctcccacctggag
cccacgaaccatgcagtcatccagaccctgatgaactccatggaccctgagtccacgcca
cccacctgctgtgtgcccacgcggctgagtcccatcagcatcctcttcattgattcagcc
aacaacgtggtctataagcagtatgaagacatggtcgtggagtcttgtggctgcaggtag
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