Phocoena phocoena (harbor porpoise): 136135038
Help
Entry
136135038 CDS
T11058
Symbol
ZKSCAN1
Name
(RefSeq) zinc finger protein with KRAB and SCAN domains 1
KO
K09229
KRAB and SCAN domains-containing zinc finger protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136135038 (ZKSCAN1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136135038 (ZKSCAN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
SCAN
zf-C2H2_4
zf-C2H2_15
zf-C2H2_6
KRAB
C2CH-3rd_BIRD-IDD
DUF7410
zf-C2H2_ZN142
Zn_ribbon_8
zf-C2H2_11
zf-C2H2_16
DUF7128
C1_4
GATA
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
136135038
NCBI-ProteinID:
XP_065748924
LinkDB
All DBs
Position
15:6490960..6505681
Genome browser
AA seq
564 aa
AA seq
DB search
MMTAESREATGLSPHAAQEKDGIVIVKVEEEDEEEHVWGQDTSLQESPPPDPEIFRQRFR
HFCYQNTFGPREALSRLKELCHQWLRPEINTKEQILELLVLEQFLSILPKELQVWLQEYR
PDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGMVPLDPVQESSSFDLPHEATQSHF
KHSSRKPRLLQPRALPATHVPAPHHEGGPRDQAMASALFSADPQAMVKIEDMAVSLILEE
WGCQNLARRNLNRDTREENYGNVISQGCENRNENEESTSKAEIAEDSASHGETTGKFQKD
FGEKRDQQGRVVERQQRNPEEKTGKEKRDPGPATVKEKKNPSTGERGPREKGKGLGRSFS
LSSNFNTPEEVPTGAKSHRCDECGKCFTRSSSLIRHKIIHTGEKPYECSECGKAFSLNSN
LVLHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHSGEKPYECNECGKAFSQSSDLTKH
QRIHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYKCTKCGKAFTRSSTLTLHHRIH
TRERASEYSPASLDAFGAFLKSCV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgctgagtcaagggaagccaccggtctgtccccccacgctgcccaggagaag
gacggcatcgtgatagtgaaggtcgaagaggaggatgaggaagagcacgtgtgggggcag
gacaccagtctgcaggagtctcctcctcctgacccggagatcttccgccagcggttcagg
cacttctgttaccagaacacttttgggcctcgagaggccctgagtcgactgaaggaactt
tgtcaccagtggctgcgaccagagataaacaccaaggagcagatcctggagctgctggtg
ctggagcagttcctttccattctgcccaaggagctccaagtctggctgcaggaataccgt
cccgatagtggagaggaggctgtgacccttctggaagatctggagctggatttatcagga
cagcaggtcccaggtcaagttcatggacctgagatgctcgcaagggggatggtgcctctg
gatccagtacaggagtcctcgagctttgaccttcctcatgaggccacccagtcccatttc
aagcattcatctcggaaaccccgcctcttacaaccacgggctctccctgccacccacgtt
cctgcccctcatcacgaggggggtcccagagaccaggcgatggcatctgcactgttctcg
gcagatccccaggcaatggtgaagatcgaggacatggccgtgtccctcatcctggaggaa
tggggatgtcagaacctggctcggaggaatctgaatagggacaccagggaggagaattat
gggaacgtgatttcccagggttgtgaaaacaggaatgagaatgaggagtccacctcaaag
gctgaaattgcagaagactcagcatcacatggggagaccacaggaaaattccagaaagat
tttggagaaaaacgtgaccagcagggcagagtagtagaaaggcagcagagaaaccctgag
gagaaaactggaaaagaaaagagagatccagggccagctacagtcaaggaaaaaaaaaac
cccagcacaggagagcgaggtccaagggaaaagggtaaaggactggggagaagtttcagt
ctgagctcaaacttcaacacccctgaagaagttccgacaggagcgaagtcccacagatgt
gatgaatgtggtaaatgcttcacaaggagttcaagccttattcgccataaaataatccac
accggagaaaagccctatgaatgtagtgagtgtgggaaagccttcagtcttaactcaaac
cttgtcctgcatcagcgaatccacacaggagagaagcctcatgaatgtaacgagtgtggc
aaagccttcagtcacagttcaaatctcattctgcatcagcggatccactctggggagaaa
ccctacgaatgtaacgagtgtgggaaggccttcagccagagctcagacctcactaagcat
cagagaatccacacgggggaaaagccctatgaatgtagtgaatgtggaaaagctttcaac
cgaaactcataccttattttgcatcggagaattcacacccgagaaaagccctataagtgc
acgaagtgcggcaaggccttcacccggagctcgaccctcactctgcatcacagaatccac
accagagagcgagcctctgaatacagccctgcctccctcgatgctttcggagcattcctg
aaaagctgtgtgtaa
DBGET
integrated database retrieval system
