Phocoena phocoena (harbor porpoise): 136135337
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Entry
136135337 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136135337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphc02000
]
136135337
Transporters [BR:
pphc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
136135337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
SRP54
RsgA_GTPase
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
136135337
NCBI-ProteinID:
XP_065749301
LinkDB
All DBs
Position
15:complement(36359376..36428793)
Genome browser
AA seq
1386 aa
AA seq
DB search
MTMFRNLKLLLWKNFILKKPKTLVTVLEILMPLLFSAIVMYLHFGSLPRNRPPVNYCAID
ITSLPEFFIQYPLKNRFQLVCIPSKSETLKSITESVEKTFGVEFEVLGYPSVPSFENYII
QDPKAFYVLTGIGFDHGFNDSKEPLPLEVKYYLRFSSFQRNYLFLRLILHEDDFQGWSTS
YLYPPNLSQEPRDYGLSDGGIPGYNKEGFLAIQHATDKAIMWHRAPNETTKLFESLSVLL
KRFPHGAYVQDSFFLVLQNEFPLFLMLSFIYIELTTINSIALEKERKLKVTPSHQIGIIF
FFTYLPYLYLAFSYNQRSHFQKIAFCLLSSVAMALGVXLISTYETKGTGIQWRNMGSIGG
EFNFTQVLLMLLLDSXMXLVAWYVESVFPGVYGTSKPWYFFLMPFYWRGEPISFTNSVLE
LGDPQKALKSKFIQEEPTDLIKGIEIQHLYKVFYKGRDEHMAVKDLTINLYRGQITVLLG
HNGAGKTTTCGMLTDMCLKDLLHQKCPEAIKCVLHILSLEDKRDSRSRFLSGGMRHKLSI
GIALIGITLIAGSKVLMLDEPTSGIDAISRRAIWDLPQQHKSDRTILLTTHFVDEANLPG
DRIAIMAKGELQCCGSSLFLKQKYGTGYYMTLVKKPHCNTEKISHLIYQHTPNAIFQSST
GEEITFILPKESVHKFEFLFTDLELRQEELGIAGFGASVTTMEEVFIRVSKLVDSSIDMQ
IIKLPSFHSHPLVSRVPVNRIKRLNSRIFSIQSSLPIQPNTGFRLLCQQFYAMFLKRATY
SWCNSMMMLSIQILVPLVILMVSLSFLNFSTSMENVPLELTLKTYGQTIVPFFISLKSRL
GPQLSEHFTDMLMAEEQIPLQLMGNVEPFLLKKLEEPEVFDQNYLVAASFEDMGNHTIVT
VLFNNQAYHSTALALALVDNVPFKLLSGARASITVFNHPQPQSNKVTSENILYEGPKGHY
LVTNLLFGMAFLSSSFSILTVKERCIKTKQVQFISGVYMATFWLSALLWDLISFLIPTLL
LLVVFLYYDEEAFTHPENIPAVVLMLMLYASIIPFIYLTSFCFDNAGSACVKLIITLTFL
SIGPVVLVSVTSEKDLGYTKVSESLDHTFLPLPGHCLGMAFSNLYYNFELQMFCNAKSLK
QTECNQVRQWIGYSPQFDALLDHMTDKETLVMYAXLRGIPKLHISACVDQILDDLLMYTY
ADNLVKTYSGGNKRKLSTSTALLGEPTVIFLDEPSSTGMDPMARSLLWGTVARACKSGKA
IVITSHSMEDCEALCTWLAIMVQHQFKCLGSPQHLKSKFGSGYSLQAKIWSDRQQDALEE
FKAFVDLTFPGSVLEGEHQGMVHYYLPGNDLSWAKTGMEPWHHGSSVCSAAEHRPSTLKG
FSEYKW
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttcaggaacttaaaacttcttctctggaagaatttcattttaaagaaacca
aagactttggtaacagtccttgaaatcttgatgccattactattttctgcaattgtaatg
tatcttcattttggtagtttgccaagaaatagacctcctgtcaactactgtgcaattgat
atcacttcactgccagaattcttcattcaatatcctctgaaaaatagatttcaactagtt
tgtatcccttccaaaagtgaaactttgaagagtatcactgaaagtgtggaaaaaaccttt
ggcgttgagtttgaagttctaggctatccttcagtaccttcatttgaaaattacataatt
caggatcccaaagctttctacgtattgactggaattggttttgatcatggcttcaatgac
agcaaggagcccttgccacttgaggttaagtattacttgcgcttcagtagttttcagagg
aattatttattcttgaggctaatactccatgaagatgactttcaaggctggagcacatcc
tatctttatcctcctaacctaagccaagaaccccgggactatggtctttccgatggggga
atcccaggatacaacaaagaaggcttcctggccatacagcatgcaacagataaagccatc
atgtggcaccgcgctcccaatgagacgaccaagttgtttgagagtctcagtgtgcttctg
aagagattcccacatggagcctatgtccaggacagtttcttcctggtccttcagaatgag
ttccctcttttcctcatgctcagcttcatctacattgagctcaccaccatcaattccatt
gcactggagaaagagagaaaattgaaggtaactccatcacatcagataggcatcatcttc
ttcttcacctacctcccatacctgtacctcgctttcagctacaaccaaaggagtcacttc
caaaagattgccttttgtctcctctccagtgttgccatggcactgggagtctgattaatc
tccacatatgagacaaaaggcacaggcatccaatggaggaacatgggcagtataggagga
gagtttaacttcactcaggtgctgctgatgctactgctggactcttaaatgngcttggtg
gcctggtatgtggagtctgtcttcccaggggtgtatggtacatccaaaccttggtacttc
tttctcatgcccttctactggcgtggagaacctatatcctttacgaattcagtgctggag
ttgggggatcctcagaaagctctgaaaagcaagttcattcaggaagagcctactgatttg
ataaaaggaattgaaatccaacatctatacaaggtgttctacaagggaagggatgaacac
atggcagtcaaagatctgaccataaacctgtaccgagggcagatcactgttctcctgggg
cacaatggagcaggcaaaaccaccacctgcggcatgctcacagatatgtgtctgaaagac
ttgttgcaccagaagtgccctgaagcaatcaaatgtgtgctgcacatcctcagtctggag
gacaaacgggactcccggagcaggttcctgagtgggggaatgaggcacaagctctccatt
ggcatcgccctcatcggcatcaccctcatcgcaggctccaaggtgctgatgctggatgag
ccaacctcaggcattgacgccatctccaggagggccatctgggaccttcctcagcagcac
aaaagtgatcgcaccatcctgctgaccacccacttcgtggatgaggccaacctgccgggg
gaccgcatcgccatcatggccaagggggagctgcagtgctgcgggtcatctctgttcctg
aagcagaaatatggtacaggatattatatgactttagtgaaaaaacctcactgtaacacg
gagaagatttctcatctgatttatcaacacacaccaaatgcaattttccagtctagcact
ggagaagaaataacatttatacttcctaaagagagtgtgcacaagtttgaatttctattt
actgacttggaactgaggcaggaagagctgggcattgccggctttggggcctctgtcaca
actatggaagaagtcttcattcgggttagtaagttggtagattccagtatagatatgcaa
atcatcaagcttccctccttccattctcacccgctggttagcagagttcctgttaataga
attaaacgtcttaattcaaggattttctcaatacagtccagcctaccaatccaaccaaac
actgggttcaggcttctctgccaacagttctatgccatgttcttgaaaagggctacatat
tcttggtgcaactcgatgatgatgctgtcaatacagatcctggtacctctggtgatcctt
atggtcagcctctcattcctcaacttcagtacaagcatggaaaatgtcccattggagttg
actctaaaaacatatggtcaaactattgttccattctttatttctctgaaatccaggctg
ggtcctcagctttcagaacattttacagatatgctcatggctgaagaacagattcctctg
cagctcatggggaacgtagagccattcctcctgaaaaagttagaggagcccgaggtcttt
gatcagaactacctagtggcagcttcctttgaagacatggggaaccacaccatagtgaca
gtgctgttcaacaaccaggcataccattccactgccctggcgctggcactggtggacaat
gtccccttcaagttgctttctggtgccagggcttcaataacggtattcaaccaccctcaa
cctcagtcaaacaaggtgacctcggaaaatatcttgtacgagggtcctaaaggacattat
cttgttaccaacttactttttggaatggctttcctgtctagctctttctccatcttgaca
gtcaaagagagatgcatcaagaccaagcaggtccagttcatcagtggtgtttacatggct
actttctggctctccgctctgctgtgggacctcatctccttcctcatccccactctgctg
ctgctggtggtgtttttgtactatgatgaagaagcttttacacacccagaaaacatccct
gctgttgtcttgatgctaatgctctatgcctctatcatccccttcatctacctgaccagc
ttctgctttgacaatgcgggtagcgcctgtgttaagctcatcatcacgctcacctttttg
agcatcggccccgttgttctcgtctcagtcacaagtgaaaaagatctaggctacacaaaa
gtctcagagtctttggatcacacatttctaccgcttccaggccactgcctggggatggct
ttctccaacttatattacaactttgaactacagatgttttgcaatgccaagagcctgaaa
cagactgagtgcaatcaagtgaggcagtggattggctactctccccagtttgatgccctg
ctggaccacatgacggacaaggagacactggtcatgtacgcctagctccggggcatcccc
aagctccacatcagtgcctgtgtggaccaaattcttgatgatttactcatgtacacgtac
gccgacaacctggtgaagacctacagcggtggcaacaagcggaagctgagcaccagcact
gccttgcttggagagcccacagtcatcttcctggacgagccatcgtccactggcatggac
cccatggcccggagcctgctctggggcaccgttgcgagggcctgcaagtctggcaaggcc
attgtcatcacctcccacagcatggaggactgtgaggccttgtgcacctggctggccatt
atggtgcagcatcagttcaagtgcctgggcagcccacagcacctcaagagcaagtttggc
agtggctactccctacaggccaagatctggagcgacaggcagcaggacgccctggaagag
ttcaaggcatttgtggacctgaccttcccaggcagtgtcctggaaggtgagcaccaaggg
atggtccattactacctgcctggcaatgacctcagctgggcgaagactggcatggagcct
tggcaccatggctcctctgtgtgttcggctgctgagcacagaccaagtaccctgaagggg
ttcagcgagtataagtggtag
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integrated database retrieval system
