Phocoena phocoena (harbor porpoise): 136135348
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Entry
136135348 CDS
T11058
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04010
MAPK signaling pathway
pphc04020
Calcium signaling pathway
pphc04713
Circadian entrainment
pphc04925
Aldosterone synthesis and secretion
pphc04927
Cortisol synthesis and secretion
pphc04929
GnRH secretion
pphc04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136135348 (CACNA1H)
04020 Calcium signaling pathway
136135348 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
136135348 (CACNA1H)
04925 Aldosterone synthesis and secretion
136135348 (CACNA1H)
04927 Cortisol synthesis and secretion
136135348 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
136135348 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
136135348 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136135348 (CACNA1H)
Ion channels [BR:
pphc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
136135348 (CACNA1H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
136135348
NCBI-ProteinID:
XP_065749310
LinkDB
All DBs
Position
15:complement(37438563..37500479)
Genome browser
AA seq
2335 aa
AA seq
DB search
MTESVQAADEVRVPLGAPAPGPAAGASPASSGAPGPEAERGSRPGASPPQSPAAKRGAEL
GADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFRP
CEDVECRSERCSILEAFDDFIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAG
MMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFF
IFGIVGVQLWAGLLRNRCFLDSTFARNSNLSFLRPYYQPEEGEENPFICSSRRDNGMQKC
SHIPSRRELRVECTLGWEAYGQPQAEGVGGTDHHTCINWNQYYNVCRSGDSNPHNGAISF
DNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQ
FSETKQRESQLMREQRARYLSNDSTLASFSEPGSCYEELLRYVGHVCRKLKRRGLRLYAR
WQSRWRKKVDPSGVPHGQGAGWRPRRAGGRATSIHHLVYHHHHHHHHHYHFSHGSPRRPG
PEPGGGDTRLVRAGAPPSPGHGPPDAESVHSVYHADCHVEGPQERARAAHAVATATASLK
LATGLGTMNYPTILPSAAGSGKGGPGPKGKRPGGPLGAGGHSPLSLSSPDPCEKIQHLVG
EHGLGQAPSRLSGLSVPCPLPSPQAGTLTCELSSCPYCTSALEDPELEFSDSDSGDSDSN
GVYEFTRDVRHGDRRDPMQPPPVADTPGSGGTRRRAQRRAVAGEQGGLGRIWASFSGKLC
RIVDSKYFNRGIMVAILTNTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAF
GPLGYIRNPYNIFDGIIVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVV
LMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTV
FQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRS
DTDEDKTSTHLEEDLDKFRDLRATEMKMYSLAVTPNGHLEGQASLPPPLIMRTAATPMPT
PKSSPHLDAAPGLLDSRRGSSSSVDPQLGDQKSLSSLRSSPCTHWGPNSAWSSRRSSWNS
LGRAPSLKRRSQCGERESLLSGEGKGSGSTDEEAEDSRPGVGASPDTRTTLLRRTESLDH
RSTLDLRPLRPAALLPTKLHDCNGLALPSELFLRIDSHKEDTAEFDDDVEDSCCSRLQKV
LEPYKPECCRSREPWALYLFSPQNRFRISCQKIIAHKMFDHVVLVFIFLNCITIALERPD
IDPGSTERVFLSISNYVFTAIFVAEMMVKVVALGLVSGEHAYLQSSWNILDGLLVLVSLV
DIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLIC
CAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECWAAHYRWVRRKYNFDNLGQALMSL
FVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVVEN
FHKCRQHQEAEEARRREEKRQRRLERKRRSTFPSPEAQRRPYYADYSPTRRSIHSLCTSH
YLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEALLKLVAFGFRRFF
KDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRA
LLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECGEDNPCEGLSRHATFSNFGMA
FLTLFRVSTGDNWNGIMKDTLRECAREDRHCLSYLPAISPIYFVTFVLVAQFVLVNVVVA
VLMKHLEESNKEAREDAELDAEVELEMAQGPSARPRPVAPPSPGASPDAPNLLVVRKVSV
SRMLSLPNDSYMFRPVAPAAAAHPHPLQEVEMETYAGASGTSGPVTAHLPPVESCPSLQV
PSAMSSPARGGDTHRALTPLGAARSPSLSRLLCTQEVVCTESLEGQVDSPRDSSPGWGEP
GGKTPVRQAPPRPPSIRIRKHTLGQNYVSSRPPALGAEEAEAPDPADEEVSHITSSAHSP
SASPAARGVVGGEPDLHRLYSVNAQGFLDQPGWADEQRRPSVEQGCGDSRPEAEEVKTRA
LEAELALGARRKKKMSPPCISIEPPTEDEGAARAPAAEGGSTTLRRRTPSCEAVPHRDPL
EPTDSAGLDTAAKGERRVQVPCRTEHLTIPNFAFEPLDVGGPRGDLFLDGSHGVAPEPRP
SSSGITAPPEPQQTEPPVASGDTPEEGWGLHLTVPESPPKKGSTPVLGDSVDKPV
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atgacagagagcgtgcaggcggccgacgaggtccgagtgcccctgggcgcgccagccccg
ggccctgcggcgggggcgtccccggcgagctctggggccccggggccagaggcggagcgg
gggtcgaggcccggtgcgtcgcccccccagagcccggcggccaagcgcggcgcggagctg
ggcgccgacgaggagcagcccgtcccgtacccggcactggcagccaccgtctttttctgc
ctcgggcagaccacgcggccgcgcagctggtgtctccggctggtctgtaacccgtggttc
gagcacgtcagcatgctggtcatcatgctcaactgcgtgaccctgggcatgttccgcccc
tgcgaggacgtcgagtgccgctcggagcgctgcagcatcctggaggcgtttgacgacttc
atctttgccttcttcgcggtggagatggtcatcaagatgatcgccctcgggctgttcggg
cagaagtgctacctgggcgacacgtggaacaggctggacttcttcatcgtcatggcgggc
atgatggagtactctctggatggacacaacgtgagcctctcggccatccggacagtgcgt
gtgctgcggcccctccgtgccatcaaccgtgtgcccagcatgaggatcctggtcacgctg
ctgctggacacgctgcccatgctcgggaacgtcctcctgctctgcttctttgtcttcttc
atcttcggcatcgtgggtgtccagctttgggctggcctgctgcgcaaccgctgcttcctg
gacagcacctttgccaggaacagcaacctcagcttcctgcggccatactaccagccggag
gagggtgaggaaaaccccttcatctgctcctctcgccgggacaacggcatgcagaagtgc
tcacacatccccagccgccgcgagctgcgcgtggagtgcacgctgggctgggaggcctat
gggcagccacaggccgagggtgtaggtggcacggaccaccacacctgcatcaactggaac
cagtactacaatgtgtgccgctcgggcgactccaacccacacaacggggccatcagcttc
gacaacatcggctatgcctggatcgccatcttccaggtgatcacgctggagggctgggtg
gacatcatgtactacgtcatggatgcccattccttctacaacttcatctacttcatcctg
ctcatcattgtgggttccttcttcatgatcaacctgtgcctagtggtgatcgccacgcag
ttctcggagacgaagcaacgggagagccagctgatgcgggagcagcgggcccgctacctg
tccaacgacagcacgctggccagcttctcagagcctggcagctgctatgaggagctcctc
cggtacgtgggccatgtgtgccgcaagctgaagcgccgtggcctccgcctctatgcccgc
tggcagagccgctggcgcaagaaggtggaccccagcggcgtgccgcacggccagggcgct
gggtggcggccacggcgggcgggagggcgcgccacctccatccaccatcttgtgtaccac
caccaccaccaccaccaccaccactaccacttcagccatggcagcccacgccggccaggc
cccgagccaggcggcggtgacaccaggctggtgcgggccggagcacctccctcgcccgga
catgggccccctgacgctgagtcagtgcacagcgtgtaccatgcagactgccacgtggag
gggccacaggagagggcccgggcggcacatgctgtggccactgccaccgccagcctcaag
ctggccactgggctgggcaccatgaactaccccaccatcctgccctcggccgcaggcagt
ggcaaaggtggccccgggcccaaggggaagcgtcctggtggacccctgggagccgggggg
cacagcccactgagcctgagcagccccgacccctgcgagaagatccagcatctggttggg
gagcacggactgggccaggcccccagccgtctgtcaggcctgagcgtgccctgccccctg
cccagcccccaggcgggcacgctgacctgtgagctgagtagctgcccgtactgcaccagc
gccctggaggaccccgagctggagttcagcgactcagacagcggagactcggacagcaac
ggggtctacgaattcacacgggatgtgcggcatggagaccgccgtgaccccatgcagcca
cccccagtggcggacacgccaggctcaggaggaacgcggcggagggcacagcggcgggcg
gtggcaggcgagcagggagggctgggccgcatctgggcctcctttagcggcaagctgtgc
cgcatcgtggacagcaaatacttcaaccgcggcatcatggtagccatcctcaccaacacg
ctgagcatgggcatcgagtaccatgagcagcctgacgagctgaccaacgccctggagatc
agcaacatcgtgttcacgagtatgtttgccctggagatgctgctgaagctgctggccttt
ggtccgctgggctacatccggaatccctacaacatcttcgatggcatcatcgtggtcatc
agcgtgtgggagatcgtcgggcaggcggacggcgggctgtcggtgctgcgcaccttccgg
ttgctgcgcgtgctcaagctggtgcgcttcctgcccgcgctgcggcgccagctggtggtg
ctcatgaagaccatggataacgtggccactttctgcatgctgctcatgctgttcatcttc
atcttcagcatcctcggaatgcacctgtttggctgcaaattcagcctgaaaacagacact
ggagacacggtccctgacaggaagaactttgactccctgctgtgggccatcgtcaccgtg
ttccagatcctcacccaggaggactggaacgttgtcctctacaacggcatggcctccacc
tcttcctgggctgccctctacttcgtggccctcatgacctttggcaactacgtgctcttc
aacctgctggtggccatccttgtggagggcttccaggcggagggtgatgccaccaggtcc
gacacagatgaagacaagacctccacccacttggaggaggacttggacaagttcagagac
ctcagggccacagagatgaagatgtactcgctggcggtgacccccaacgggcacttggag
ggccaggccagcctaccccctcccctcatcatgcgcacagcagccacacccatgcccacc
cccaagagctccccacacctggatgcggcccctggcctcctggactcacggcgtgggagc
agcagctccgtggacccccaactgggggaccagaagtctctgtccagcctccgcagctcg
ccctgcacccactggggccccaacagcgcctggagcagccggcgctccagctggaacagc
ctgggccgcgcacctagcctcaagcgcaggagccagtgcggggagcgtgagtcgctgcta
tccggtgagggcaagggcagcggcagcacagacgaggaggctgaggacagcaggcctggt
gtgggagcctctccagacacacgtaccacactgctgcggcgcaccgagtccctggaccac
cgcagcacgcttgacctgcggcccctgcggccggctgccctgctgcccaccaagctccac
gactgcaacgggctggccctgcccagcgagttattcctgcgcatcgacagccacaaggag
gacacggccgagtttgacgatgatgtggaggatagctgctgctcccggctgcagaaagtg
ctggagccctacaagcccgagtgctgtcggagccgcgagccctgggccctgtacctcttc
tccccacagaacaggttccgcatctcctgccagaagatcattgctcacaagatgtttgat
cacgtcgtcctggtcttcatcttcctcaactgcatcacgatcgccctggagaggcccgac
attgaccccggcagcaccgagcgcgtcttcctcagcatctccaactacgtcttcacggcg
atcttcgtggccgagatgatggtgaaggtggtggccctgggcctggtctctggtgagcat
gcctacctgcagagcagctggaacatactggatgggctgctggtcctggtgtccctggtt
gacatcatcgtggccatggcgtcggccggtggtgccaagatcctgggcatcctgcgtgtg
ctgcgcctgctgcggacactgcggcccctgcgggttatcagccgtgccccaggcctcaaa
ctggtggtggagactctgatatcgtcactcaggcccatcggaaacattgtcctcatctgc
tgtgccttcttcatcatcttcggcatcctaggggtgcagctcttcaaggggaagttttac
tactgcgagggcgctgacaccaggaacatctccactaaagccgagtgctgggctgcacac
taccgctgggtgcgacgcaagtacaacttcgacaacctgggccaggcgctgatgtccctg
ttcgtgctctcatccaaggacggctgggtgaacatcatgtacgacgggctggacgccgtg
ggcatagaccagcagccggtgcccaaccacaacccctggatgctgctctacttcatctcc
ttcctgctcatcgtcagcttctttgtgctcaacatgttcgtgggcgtcgtggtggagaac
ttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgggaagagaagcgg
cagcggcgcctggagaggaaacgcaggagcactttccccagcccagaggcccagcgccgg
ccctactatgcggactactcacccacgcgtcgctccatccactctctgtgcaccagccac
tatctggacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggag
cactataaccagcccaagtctctggacgaggccctcaagtactgcaattatgtgttcacc
atcgtcttcgtctttgaggccctgctgaagctggtggcgtttgggttccggaggtttttc
aaggacaggtggaaccagctggacctggccatcgtcctgctgtccatcatgggcatcaca
ctggaggagatagagatgaacgcggcgctgcccatcaaccccaccatcatccgcatcatg
cgtgtgctccgcatcgcccgcgtgctgaagctgctcaagatggccacgggtatgcgggcc
ctgctggacaccgtggttcaggcgctgccccaggtagggaacctcggcctgcttttcatg
ctcctgttttttatctatgctgccctgggagtggagctgtttgggaggctcgagtgcggt
gaggacaacccctgcgagggcctgagcagacacgccaccttctccaactttggcatggct
ttcctcacactgttccgcgtgtccacgggggacaactggaacgggatcatgaaggacacg
ctgcgggagtgtgcccgtgaggacaggcactgcctcagctacctgccggccatctcgccc
atctatttcgtcaccttcgtgctggtggcccagttcgtgctggtcaacgtggtggtggcc
gtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaggatgccgagctggac
gcggaggtcgagctggagatggcgcaggggccctccgcccgccccaggcccgtggccccg
ccgagcccgggtgcctcgccggacgcccccaacctgctggtcgtgcgcaaggtgtctgtg
tccaggatgctctcactgcccaacgacagctacatgttccggcccgtggcacccgctgca
gccgctcatccccacccgctgcaggaggtggagatggagacctacgcgggcgcctcgggc
acctcgggcccagtcaccgcccacttgccgcctgtggagtcctgcccatccctccaggtc
ccgtcggctatgtcctccccggccaggggcggcgacacccaccgtgccctgacccctctg
ggtgcagcccgctcccctagtctcagccggctgctctgcacacaggaggtagtctgcaca
gagtccctagaagggcaggtcgatagtcccagggacagcagcccgggctggggagagcct
ggtgggaagacccctgtgaggcaggcgcccccgcggccccccagcatccgcatccgcaag
cacactttgggacagaactacgtctccagccggccaccggccctgggcgcagaggaggcc
gaggccccagacccagctgatgaggaggtcagccacatcaccagctctgcccacagcccc
tcggcctcacctgctgcccgtggggtggtgggcggtgagccagacctgcacaggctctac
agtgtcaatgcccagggcttcctggaccagccaggctgggcggacgagcaaaggcggccc
tccgtggagcagggctgtggggacagccgcccagaggccgaggaggtgaagacccgggcc
ctggaggccgagctggccctgggggcacgcaggaagaagaagatgagccccccctgcatc
tccatagagccccccacggaggacgagggtgcggcccgggcccctgcagcggagggcggt
agcaccaccctgcggcggagaaccccatcctgcgaggctgtgccccacagggaccccctg
gagcccacagacagtgcagggttggacactgctgccaagggggaacggcgggtccaggtc
ccctgccgcacggaacacctgaccatcccgaactttgcctttgagccgctggatgtgggg
ggccccaggggggacctgttcttggatggtagccatggtgtcgccccagagcccaggcct
tcctcctcaggcatcacggcacctcccgaaccccagcagacggagcctccagtggcctcg
ggagacaccccagaggaggggtgggggctgcacctcacagtccctgagagcccaccgaag
aaagggtccaccccagtcctgggtgacagtgtggacaagcccgtgtag
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integrated database retrieval system
