Phocoena phocoena (harbor porpoise): 136135386
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Entry
136135386 CDS
T11058
Symbol
TMC2
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphc02000
]
136135386 (TMC2)
03037 Cilium and associated proteins [BR:
pphc03037
]
136135386 (TMC2)
Transporters [BR:
pphc02000
]
Other transporters
Pores ion channels [TC:
1
]
136135386 (TMC2)
Cilium and associated proteins [BR:
pphc03037
]
Other cilia and associated proteins
Stereociliary proteins
136135386 (TMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
NCA2
TRAP_beta
Motif
Other DBs
NCBI-GeneID:
136135386
NCBI-ProteinID:
XP_065749340
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Position
15:complement(58798343..58862059)
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AA seq
883 aa
AA seq
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MGSLGKGEAVNCYRSGRRPSRKRTHKAENAPGRRRAPPGQKERAGGSPGSGSPRRKQAER
RGRREQLGGPERGSAEKTCGGRRKRDERASLREHRAPPKKEKEVPRKEEMWKQLKKHRSS
SLASSTSGGESLSEEELARILEQVEDKKKLIATMRTKPWPMARKLAGLREAQEFVEKYEG
ALGKGKGKRLYAYRMLMAKKWVKFKRDFDNFKTQCIPWEMKIKDIESHFGSSVASYFIFL
RWMYGVNLVLFGLIFGLVIIPEVLMGMPYGSIPRKTVPRAEEEKAMDFSVLWDFEGYIKY
SALFYGYYNNQRTIGWLRYRLPMAYFMVGVSVFGYSLMIVIRSMAGNTQGSTNDGESDNF
TFSFKMFTSWDYLIGNSETADNKYASITISFKESIVDEQESNKEENVHLTRFLRVLANFL
IICCLCGSGYLIYFVVKRSQEFSKMQNVSWYERNEVEIVMSLLGMFCPPLFETIAALENY
HPRIGLKWQLGRIFALFLGNLYTFLLALMDDVHLKLSNEEKIKNITHWTLFHYYNSSGWN
ESVPRPPLHPADVPRGSCWETAVGIEFMRLTVSDMLVTCITILLGDFLRACFVRFMNYCW
CWDLEAGFPSYAEFDISGNVLGLIFNQGMIWMGSFYAPGLVGINVLRLLTSMYFQCWAVM
SSNVPHERVFKASRSNNFYMGLLLLVLFLSLLPVAYTVMSLPPSFDCGPFSGKNRMYDVI
QETVENDFPTFLGKIFAFLANPGLIIPAILLMFLAIYYLNSVSKSLSRANAQLRKKIQAL
REVEKSHKSFKGRATARDSEDTAKRNSKNATQLTKEGTAHHPASPSQTLDQKAXGSRASS
SAGRTVSPASXAAPGVRPDSGQAQPQACPWRSASGRNAQRPPH
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccttgggaagggagaagctgtgaactgttacaggtccgggaggagaccctcg
aggaagcggactcacaaagccgagaacgcgccgggcaggcgccgagccccgcctggccag
aaggagcgggccgggggcagcccggggtcggggtctccccggaggaagcaggcagagcgc
aggggacgcagagagcagctggggggaccggagcgaggctcggcagagaagacctgcgga
ggaaggaggaagagggacgagagagcttccctcagggagcaccgagcacctccaaagaag
gaaaaggaggtgccgaggaaggaggagatgtggaagcagctgaagaaacacaggtcatcc
tccttggcctccagcacctccggtggggagtctctgtctgaggaggaactggcccggatt
ctggagcaggtggaagacaagaagaagctcatcgccaccatgcggaccaagccctggccc
atggcgaggaagctggcggggctcagggaggcccaagaatttgtggagaagtatgaagga
gccttgggaaaggggaaaggcaagcgactctacgcctataggatgctgatggctaagaaa
tgggtcaagtttaaaagagactttgataatttcaagactcaatgtattccctgggaaatg
aagatcaaggacattgaaagtcactttggttcttcagtggcatcatatttcatctttctc
cgatggatgtatggagttaacctcgtcctttttggcttaatatttggtctagtcataatc
ccagaggtgctgatgggcatgccctatggaagtatacccagaaagacggtgcctcgggct
gaggaagaaaaagccatggatttttccgtcctttgggattttgagggctacatcaagtat
tccgctctcttctacggctactacaacaaccagaggaccatcgggtggctgaggtacagg
ttacccatggcttacttcatggtgggggtcagcgtgttcggctacagcctaatgatcgtc
attagatcgatggccggcaacacccagggcagcacgaatgacggggagagcgataacttc
acattcagcttcaagatgttcaccagctgggactacctgatcgggaattcagagacggcc
gacaacaaatacgcctccatcaccatcagcttcaaggaatcaatagtggatgaacaagag
agtaacaaagaagaaaatgtccatctgacaagatttctccgtgtcctggccaactttctc
atcatctgctgtttgtgtggaagtgggtacctcatttactttgtggtgaaacgatcccaa
gaattctccaaaatgcagaatgtcagctggtatgaaagaaatgaggtagaaattgtgatg
tccctgcttgggatgttttgtccccctctgtttgaaaccattgctgccctggagaattac
cacccacgcattggactgaagtggcagctgggacgcatctttgcactcttcctcggaaac
ctctacacgtttcttttggccctgatggatgacgtccacctgaagctttctaacgaagag
aaaataaagaacatcactcactggactctgtttcactactacaactcctcgggttggaac
gagagcgtcccccggccacccctacaccctgcagatgtgccccggggttcttgctgggag
acagctgtgggcattgaattcatgaggctgacggtgtcggatatgctggtaacgtgtatc
accatcctgctgggggacttcctgcgggcttgctttgtccggttcatgaactactgctgg
tgctgggacctggaggctggatttccctcatatgctgagtttgatattagtggaaatgtg
cttggtttgatcttcaaccaaggaatgatctggatgggctccttctatgccccaggactg
gtgggcatcaacgtgctgcgcctgctgacctccatgtacttccagtgctgggcagtgatg
agcagcaacgtcccccacgagcgcgtgttcaaagcctcccgatccaacaacttctacatg
ggcctcttgctgctggtgcttttcctcagcctcctgccggtggcctacaccgtcatgtcc
cttccaccctcctttgactgcgggccattcagtgggaaaaacagaatgtatgacgtcatc
caagagacggtcgaaaacgatttcccaaccttcctgggcaagatttttgctttcctcgcc
aatccaggcctgatcattccagccatcctgctgatgttcctggccatttactacctgaac
tcagtttccaaaagcctttcccgagctaatgcccagctgagaaagaaaatccaagcgcta
cgtgaagttgaaaagagccacaaatctttcaaaggcagagccacagccagagattcagag
gacacagctaaacgcaactccaaaaatgccacccagctcaccaaagaagggaccgcacat
caccctgctagcccaagccagaccctggaccagaaggcgtagggctctagggcctccagt
tctgctggcaggactgtgtcgcctgcctccncagcagcccctggcgtcagaccagactct
ggccaagcccagcctcaggcttgtccttggaggtcagcctctggaaggaatgctcagaga
cctccccactga
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