Phocoena phocoena (harbor porpoise): 136135490
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Entry
136135490 CDS
T11058
Symbol
SNAI1
Name
(RefSeq) zinc finger protein SNAI1
KO
K05707
snail 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
136135490 (SNAI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136135490 (SNAI1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
136135490 (SNAI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-met
zf-Di19
zf-C2HC_2
zf-C2HE
Zn_ribbon_Elf1
Zf-C2H2_ZNF451_1st
Teflon_C
Zf-C2H2_ZNF451_6th
zf-C2H2_15
DUF7410
Zf-C2H2_ZNF451_C
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
136135490
NCBI-ProteinID:
XP_065749435
LinkDB
All DBs
Position
15:76337390..76343020
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AA seq
264 aa
AA seq
DB search
MPRSFLVRKSACSRRRPNYSELHDSSPEFTFQQPYDQAHLLAAIPPPEVLNPTASLPTLI
WDSLLAPQAQPIGWASLLPQEIPKAVELTSLSDEDSGKGSQPPSPPSPAPSSFSSTSASS
LEAEGYAAFPGLGRLPKQLAGLSVAKDPQSRKAFNCKYCNKEYISLGALKMHIRSHTLPC
VCSTCGKAFSRPWLLQGHVRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCKT
CSRTFSRMSLLHKHQESGCSGGPR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctctttcctcgtcaggaagtccgcctgctcccgccggagacccaattacagt
gagctccacgactcttctccagagttcacttttcaacagccctacgaccaggcccacctg
ctggcagccatcccaccacccgaggtcctcaatcccacggcctcactgcctacgctcatc
tgggactctctcctggcaccccaagcccagccgattggctgggcctctcttctgccccag
gagatccccaaggccgtcgagctgacctccctgtctgacgaggacagcgggaaaggctcc
cagccccccagcccaccctcaccggctccttcgtccttctcttccacctcagcctcctcc
ctggaggccgagggttatgctgccttcccaggcttgggccggttgcccaagcagctggct
gggctctccgtggccaaggacccccagtctcgcaaggccttcaactgcaaatactgcaac
aaggagtacatcagcctgggtgcccttaagatgcacatcagaagccacacgctgccttgc
gtctgtagcacctgcgggaaggccttctccaggccctggctgctgcagggccacgtccgg
acccacactggcgaaaagcccttctcctgcccccactgcagccgcgccttcgctgaccgc
tccaacctgcgggcccatctccagacccactcggatgtcaaaaagtaccagtgcaagaca
tgctccagaaccttctcccgaatgtccctgctccacaagcaccaagagtcaggctgctca
ggggggccccgctga
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