Phocoena phocoena (harbor porpoise): 136135534
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Entry
136135534 CDS
T11058
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136135534 (VPS35L)
Membrane trafficking [BR:
pphc04131
]
Protein recycling
Others
Retriever complex
136135534 (VPS35L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4698
Motif
Other DBs
NCBI-GeneID:
136135534
NCBI-ProteinID:
XP_065749486
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Position
15:complement(22989112..23122333)
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AA seq
963 aa
AA seq
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MAVFPWHSRNRNYKAEFASCRLEAVPLEFGDYHPLKPITVTESKTKKVSRKGSTSSTSSS
SSSSVVDPLSSVLDGTDPLSMFAASADPASLAATTDNSRKKRDRDDNSIVGSDFEPWASK
RGEILARYTTTEKLSINLFMGSEKGKAGTAISAMSEKVRTRLEELDDFEEGSQKELLNLT
QQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDT
FGKLVYERIFSMCMDNHSILPDHFSPENVNDTAKETCLNWFFKIASIRELIPRFYVEASI
LKCNKFLSKTGISECLPRLTCMVRGIGDPLVSVYARAYLCRVGMEVAPHLKESLNKNFFD
FLLTFKQIHSDTVQNQLVLQGVELPSYLPLYSPAMDWIFQCISYHAPEALLTEMMERCKK
LANNALLLNSVMSAFRAEFIATRSMDFIGMIKECDESGFPKHLLFRSLGLNLALANPPES
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCKHFTKREVNTVLADVIKHMTPDRAFE
DSYPQLQSIIKKVIAHFHDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMEVFIKHQQEP
TKDPVILNALLHICKTMHDSVNALTLEDEKRMLAYLINGFIKMVSFGRDFEQQLSFYVEA
RSMFSNLEPVLVQLIHSVNRLAMETRKVMKGNHSRKTAAFVRACVAYCFITIPSLVGIFT
RLNLYLHSGQVALANQCLSQADAFFKAAISLVPEVPKMINIDGKMRPSESFLLEFLCNFF
STLLIVPDHPEHGVLFLVRELLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHV
DKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEALKRQSSLGLSFFNSILA
HGDLRSNRLNQLSVNLWHLAQRHGCADTRTMVKTLEYIKKRSKHPDMGHLTDLALRLPLQ
TRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctttccttggcattccaggaacaggaactacaaggctgagtttgcatcatgc
cggttggaggctgtaccactggaatttggggactatcacccactgaaacccataactgtc
acagagtcaaagacaaagaaagtgagccggaaaggaagcacttcttccacgtcctcttca
tcctccagctccgtggtggacccactgagcagcgtcctggatgggaccgaccccctctcc
atgtttgcggcctctgctgaccctgcatccctggcggctaccacggacaactccagaaag
aaacgtgacagagatgataactccattgtaggatcagattttgagccttgggccagcaaa
cgaggagaaatccttgcccggtatactaccacggaaaagctctctatcaatctttttatg
ggatctgaaaaaggcaaagctgggactgccatatccgcaatgtcggagaaggttcggacc
aggctggaggagctggatgattttgaggagggatcccagaaggagctgctgaatttgact
cagcaggattacgtgaaccgcatagaagagctcaaccagtcgctgaaggacgcctgggcc
tcggaccagaaagtgaaggctctaaaaatagtcatccagtgttcaaagcttctttcggac
acaagtgttattcagttctacccaagcaaatttgtccttatcaccgacatacttgataca
tttggaaagctggtatacgagcgcatcttttccatgtgtatggataaccacagcatctta
ccagatcacttctctccagagaatgtaaatgacacagccaaagaaacatgcttaaattgg
tttttcaagattgcttccatcagggaactcattccgagattctatgtggaagcatccatc
ctgaagtgtaacaagttcctctccaaaacggggatttcagagtgtctgccccggctgact
tgcatggtccgagggatcggggaccctctggtgtcggtgtacgccagggcctacctgtgc
agggtgggcatggaagtggctccgcatctcaaagaaagcctaaataagaacttctttgac
ttcctcctcacattcaaacagattcacagcgatactgtccagaaccagctggtgctccag
ggagtggagcttccatcctacctccccttgtactcgcctgccatggactggatcttccag
tgcatttcctaccacgcccccgaggctctgctaacggaaatgatggagagatgtaagaaa
ctagcaaacaatgccttgctgttgaattccgtaatgtcagctttccgggccgagttcatc
gccacaaggtccatggatttcatcggcatgattaaagagtgcgatgagtctggtttcccc
aagcatcttctctttcgctcactgggcttaaacttggccttggctaatcctcctgagagt
gatcgacttcagattctcaatgaagcttggaaagttatcaccaaattgaagaatccacag
gactacattaattgtgccgaagtgtgggtagagtacacctgcaaacatttcacgaaacga
gaggtgaatactgttttggccgatgtcatcaagcacatgactccagatcgtgcatttgaa
gactcctaccctcagcttcagtccataattaagaaagtaattgcacacttccatgatttc
tcagttcttttttcagtggaaaaatttctgccatttctggacatgttccaaaaagagagt
gtgcgggtggaggtttgcaaatgcatcatggaagtttttatcaagcatcagcaagagccc
actaaggaccccgtcattctgaacgcccttttgcacatttgcaagaccatgcatgactct
gtgaatgcactcactcttgaggatgagaaaagaatgctggcatatttgattaatggattt
ataaaaatggtgtcttttggccgtgattttgaacaacagctgagtttttacgttgaggcc
aggtcgatgtttagcaatctggaacctgttcttgtgcagttgattcatagtgtgaaccgg
ttggcaatggaaacaagaaaagtaatgaaaggaaatcattccagaaagacggctgcattt
gtccgggcctgcgttgcctactgcttcattaccattccctccctggtgggaatcttcacc
cgcctcaatctctacctgcattctggtcaggtggccttggccaaccagtgcctctcccaa
gctgatgcctttttcaaagccgctataagcctcgttccagaagttccaaagatgattaat
attgacggaaagatgcggccctcagaatcgttccttctggaattcctctgcaatttcttt
tctactttattaatagttccggatcatccggaacacggggttctgtttcttgttcgagag
ctgctcaacgtgatccaggactacacctgggaagacaacagtgatgagaaaatccgcatc
tacacctgtgtcctgcacctgctgtccgccatgagccaggagacctatctctaccacgta
gacaaagttgactccaatgacagcctctacgggggagactccaagtttctggctgagaac
aacaagctgtgcgagacggtgatggctcagatcctggagcatctgaaaaccctggccaag
gacgaggccctaaagcgccagagctcgttgggcctttccttctttaacagcatcttggcc
catggggacctgcgcagtaacaggctcaaccagctgtccgtcaacctgtggcacctggca
cagaggcacggctgtgcggacaccaggaccatggtgaaaactctggaatacatcaagaag
cgaagcaaacacccagacatggggcatctgaccgatctggccctcaggctccctctgcag
acgaggacctga
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