Phocoena phocoena (harbor porpoise): 136135707
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Entry
136135707 CDS
T11058
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03320
PPAR signaling pathway
pphc04659
Th17 cell differentiation
pphc04919
Thyroid hormone signaling pathway
pphc04920
Adipocytokine signaling pathway
pphc04928
Parathyroid hormone synthesis, secretion and action
pphc05200
Pathways in cancer
pphc05202
Transcriptional misregulation in cancer
pphc05207
Chemical carcinogenesis - receptor activation
pphc05216
Thyroid cancer
pphc05222
Small cell lung cancer
pphc05223
Non-small cell lung cancer
pphc05226
Gastric cancer
pphc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
136135707 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
136135707 (RXRG)
03320 PPAR signaling pathway
136135707 (RXRG)
04919 Thyroid hormone signaling pathway
136135707 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
136135707 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136135707 (RXRG)
05202 Transcriptional misregulation in cancer
136135707 (RXRG)
05207 Chemical carcinogenesis - receptor activation
136135707 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
136135707 (RXRG)
05216 Thyroid cancer
136135707 (RXRG)
05222 Small cell lung cancer
136135707 (RXRG)
05223 Non-small cell lung cancer
136135707 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
136135707 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136135707 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pphc03310
]
136135707 (RXRG)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
136135707 (RXRG)
Nuclear receptors [BR:
pphc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
136135707 (RXRG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
136135707
NCBI-ProteinID:
XP_065749714
LinkDB
All DBs
Position
1:complement(121127516..121172361)
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPSHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPG
IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtacggaaattattctcacttcatgaagtttcccacaggcttcggaggttcccccagc
cactctggctccacgtccatgagcccgtcggcagccttgtccacagggaagcccatggac
agccaccccagctacactgacaccccagtgagtgccccacggactctgagtgcagtgggg
acccccctcaatgccctgggctctccatatcgagtcatcacttccgccatgggcccaccc
tcaggagctcttgcagcccctccaggaatcaatttggttgccccgcccagctctcagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaaacccttaccagggcttcctggc
attggaaacatgaactacccatccactagccctggatctctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtgtacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatctacacgtgtcgggataataaagac
tgcctcattgacaagcgtcagcgcaaccgctgccagtactgtcgctatcagaagtgcctt
gtcatgggcatgaagagggaagctgtgcaagaagaaaggcagagaagccgggagcgggct
gagagtgaggcagaatgtgccagtagtggccatgaagatatgcccgtggagaggattctg
gaggctgaacttgctgttgaaccaaagacagaatcctacggtgacatgaacatggagaat
tcgacaaatgaccctgtcaccaacatatgccatgctgctgacaagcagctctttactctc
gttgaatgggccaagcgtattccccacttctctgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgagttgctgatcgcctccttttcccaccgctcggtttct
gtgcaggatggcatccttctggccacgggtttacacgtccaccggagcagtgcccacagt
gctggggttggctccatctttgacagagttctgactgagctcgtctccaaaatgaaagac
atgcagatggataagtcggagctggggtgcctacgagccatcgtgctatttaacccagat
gccaagggtctgtccaacccctctgaagtggagactctgcgagagaaggtttatgccacc
ctcgaggcctacaccaagcagaagtacccggaacaaccaggcaggtttgccaagctgttg
ctgcgcctcccagccttgcgctccatcggcttgaaatgcctggagcacctcttcttcttc
aagctcatcggggacacacccattgacaccttcctaatggagatgttggagaccccactg
cagatcacctga
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