Phocoena phocoena (harbor porpoise): 136135714
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Entry
136135714 CDS
T11058
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04136
Autophagy - other
pphc04140
Autophagy - animal
pphc05010
Alzheimer disease
pphc05014
Amyotrophic lateral sclerosis
pphc05016
Huntington disease
pphc05017
Spinocerebellar ataxia
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136135714 (WIPI2)
04136 Autophagy - other
136135714 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
136135714 (WIPI2)
05014 Amyotrophic lateral sclerosis
136135714 (WIPI2)
05016 Huntington disease
136135714 (WIPI2)
05017 Spinocerebellar ataxia
136135714 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
136135714 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136135714 (WIPI2)
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136135714 (WIPI2)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
136135714 (WIPI2)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136135714 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF7165
ANAPC4_WD40
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
EIF3I
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
136135714
NCBI-ProteinID:
XP_065749730
LinkDB
All DBs
Position
15:3632991..3664920
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFST
DGVFLSTSSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSTSHDCPLVTQTYSTAVAKGPHVPSSPTALAYADELGAVGGAGLEDEARAL
RLEDDSEQPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagtggcgaggctggcgccagccagctactcttcgccaacttc
aaccaagacgtcacgtctctagctgttggtagtaaatccggttataaatttttctccctt
tcttctgtggataaactggaacagatctatgaatgcactgacactgaagatgtgtgcatc
gtggaaaggttgttctcaagcagcttggtggccatcgttagcctcaaagcccccaggaag
ctgaaggtttgccactttaagaaggggaccgagatctgcaactacagctactccaacacc
atcctggctgtgaagctgaacaggcagaggctgatcgtgtgcctggaggagtctctgtat
atacacaacatccgggacatgaaggtgctgcacaccatccgggagacgcccccaaacccc
gcaggcctgtgtgcgctgtccatcaacaacgacaactgttacctggcgtatccaggcagc
gcgaccatcggggaggtgcaggtcttcgacaccatcaacctgagagctgcaaacatgatc
ccggctcatgacagccctttagccgcactggccttcgacgccagcggaaccaagctcgcc
actgcttccgagaaggggaccgtgattagggtattttccattccagaaggacaaaaactc
ttcgagttccggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcacg
gacggcgtgttcctgtccacctccagcaacacggagactgtgcacatcttcaagctcgag
actgtgaaagaaaagcctcaggaggagcccaccacctggaccggctacttcgggaaggtg
ctcatggcgtccaccagctacttgccctcccaagtgacagaaatgttcaaccagggcaga
gcctttgccacagtccgcctgcctttctgtggccacaagaacatctgtgcgctggccaca
atccagaagattccccgattgctggtgggagcctcggacgggtacttgtacatgtacaat
ctggacccccaggaggggggagagtgcaccttgatgaaacagcacaagttggacggcagc
atggagacgaccaatgagatcctagactccacgtcccacgactgccccttggtgacgcag
acgtacagcacggccgtggccaagggtcctcacgtgccttcgtccccaacggcactggcc
tatgcagacgagctgggcgcggtgggcggcgcaggcctggaggacgaggcccgcgccctg
cggctggaggacgacagcgagcagcctcccatgatcctccggacagactga
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