Phocoena phocoena (harbor porpoise): 136135740
Help
Entry
136135740 CDS
T11058
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04514
Cell adhesion molecule (CAM) interaction
pphc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136135740 (CDH4)
04519 Cadherin signaling
136135740 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136135740 (CDH4)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Major cadherins
136135740 (CDH4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
MiaB_C
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
136135740
NCBI-ProteinID:
XP_065749765
LinkDB
All DBs
Position
15:85487883..86043181
Genome browser
AA seq
916 aa
AA seq
DB search
MTVGSGVLLVLLSLSGALRAHNGDLTARETCKAGFSEEDYTALISQNILEGEKVLKVKFS
SCLGTKGTHYETDSMDFKVGADGTVFATRELQIPSGQVAFTVTAWDRQTAEHWDAVVRLL
VAQTSPTSSGHKPRKGKKSAPLDPVQPPNDTLLPWPQHQSSNGLRRQKRDWVIPPINVPE
NSRGPFPQQLVRIRSDKDSDIPIRYSITGVGADQPPVEVFSIDSMSGRMYVTRPMDREER
ASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFLSQLYNGSVDEGSRPGTYVMTVT
ASDADDGTTANGMVRYRIMTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQ
ATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTASTYAGEVPENRVEMVVANLTVMDRDQ
PHSPNWNAVYRIISGDPSGHFSVRTDPVTNEGMVTVVKAVDYELNRAFMLTVMVSNQAPL
ASGIQMSFQSTAGVTISVMDINEAPYFPSNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQQ
AVRYSKLSDPANWLHINATNGQISTAAVLDRESLYVKNNAYEATFLAADNGIPPASGTGT
LQIYLIDINDNAPELLPKEAQICEKPSLNTINITAADADVDPNIGPYVFELPFVPASVRK
NWTITRLNGDYAQLSLRILYLEAGVYDVPIVVTDSGNPPLSNTSIIKVKVCPCDENGDCT
TVGAVAAAGLGTGAIVAILGCIVVLLTMVLLFVVWRRRREKERHTKQLLIDPEDDVRDNI
LKYDEEGGGEEDQDYDLSQLQQPEAVEHVLSKAPGVRRVDERPVGAEPQYPARPVVPHPG
DIGDFISEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLDSSSSGDQDYEYLNDWG
PRFRKLADMYGGGQED
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgggctccggcgtgctcctcgtgctgctctcgctctccggcgcgctccgggcc
cacaatggagatcttacagccagggagacctgcaaagctggattctctgaagaagattac
acggcattaatctcccaaaatattctggaaggagagaaggtcctcaaagtcaagttcagc
agctgcctggggaccaaggggacacactatgagaccgacagcatggacttcaaagtcggc
gctgacgggacggtcttcgccacccgggagctgcagatcccctccgggcaggtggccttc
accgtgaccgcgtgggaccgccagacggccgagcactgggacgccgtggtacggctgctg
gtggcccagacctcacccacgagctccggacacaagccccggaaagggaagaagagtgca
cccctggaccctgtccagccgccaaatgacacactgttgccgtggccacagcatcagagt
tccaatgggctgaggcgccagaaacgggactgggtcatcccgcccatcaacgtgccagaa
aactcccgcgggcccttcccgcagcagctggtgaggatccggtccgacaaagacagcgac
atccccatccgctacagcatcacgggcgtgggcgccgaccagcccccggtggaggtcttc
agcatcgactccatgtctggccggatgtatgtcacacggcccatggaccgggaggagcga
gcctcctaccacctccgagcccacgccgtggacatgaatggcaacaaggtggagaacccc
atcgacctgtacatctacgtaattgacatgaacgacaaccgccccgagttcctcagccag
ctgtacaacggctccgtggacgaaggctccaggccaggcacctacgtgatgacggtcaca
gccagcgacgctgacgatggcaccacggccaatgggatggtgcgctaccggatcatgacc
cagaccccgcagagcccctcccagaacatgttcaccatcaacagtgagacaggggacatc
gtgacagtggcggccggcctggaccgagagaaagttcagcagtacacagtcattgttcaa
gcaacagacatggaaggaaacctgaactatggcctgtccaacacggccacagccatcatc
acggtgacagacgtgaacgacaacccgccagagttcactgccagcacgtacgcaggggaa
gtccccgaaaaccgggtggagatggtggtcgcaaacctcactgtgatggaccgagatcag
ccccactccccgaactggaacgctgtctaccgcatcatcagcggggacccctcgggccac
ttcagcgtccgcacggaccccgtcaccaacgagggcatggtcaccgtggtgaaggcggtc
gactatgagctgaacagagcgttcatgctgaccgtgatggtgtccaaccaggcgcccctg
gccagcgggatccagatgtccttccagtccacagcgggggtgaccatctcagtcatggac
atcaacgaggccccctacttcccctcgaaccacaagctgatccgcctggaggagggcgtg
cccaccggcaccgtgctcaccacgttttcagcagtggaccctgaccggttcatgcagcag
gccgtgagatactcaaagctgtcggacccagcgaactggctgcacattaatgccaccaac
ggtcagatcagcacggcggccgtcctcgaccgcgagtctctctacgtcaaaaacaacgcc
tatgaggccaccttcctggcagctgacaacgggatccctccggccagcggcaccgggacc
ctccagatctatctcatcgacatcaatgacaacgcccccgagctgctgcccaaggaggcg
cagatctgtgagaagcccagcctgaacaccatcaacatcacggcggctgacgcggacgtc
gaccccaacatcggcccctacgtcttcgagctgcccttcgttccagcgagcgtgcggaag
aactggaccatcacccgcctcaatggtgactacgcccagctcagcctgcgcatcctgtac
ctggaggccggagtgtacgacgtccccatcgtcgtcacggactcggggaacccgcccctg
tccaatacgtccatcatcaaagtcaaggtgtgcccgtgcgacgagaacggcgactgcacc
accgtgggcgcggtggcagcagccgggctgggcacgggcgccatcgtggccatcctcggc
tgcatcgtggtcctgctcaccatggtcctgctgttcgtcgtgtggaggaggcggcgggag
aaggagcggcacacgaagcagctgctcatcgaccccgaggacgacgtacgcgacaacatc
ctcaagtacgacgaggaagggggcggcgaggaggaccaggactacgacctcagccagctg
cagcagccggaggccgtggagcatgtgctgagcaaggcccccggggtgcggcgggtggac
gagcggccggtgggcgccgagccccagtacccggccaggccggtggtgccccacccagga
gacatcggggacttcatcagcgagggactccgcgcagccgacaacgaccccacagcgccg
ccctacgactcgctgctggtcttcgactacgagggcagcgggtccaccgcgggctccgtc
agctccctggactcatccagctccggggaccaggactacgaatacctgaacgactggggg
cccaggttcaggaagctggcggacatgtacggaggcggccaggaggactaa
DBGET
integrated database retrieval system
