Phocoena phocoena (harbor porpoise): 136135889
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Entry
136135889 CDS
T11058
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136135889 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136135889 (SEC24C)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136135889 (SEC24C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
136135889
NCBI-ProteinID:
XP_065749797
LinkDB
All DBs
Position
16:complement(59112561..59137773)
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AA seq
1097 aa
AA seq
DB search
MNVNQSAPPVPPFGQPQPVYLGHHQSSYGGQPGSTTAPTSYGAYNGPVPGYQQTPPPGVS
RAPPSSGAPPASTAQGPCGQTAYGQFGQGDVQNGPSSTVQMQRLPGYQPFGSAILAPVVS
QPAVLQPYGPPPTSAQVTAQLAGMQISGTVAPASPPSGLGYGPPTSLASASGSFPNSGLY
GSYPQGQAPPLGQAQGHPGTQPPQRSVPLQASSFTPPASGGPRMPSMTGPLLPGQSFGGP
PVSQPNHVSSPAPQALPPGTQMTGPPGPPLPPMHSSQQPGYQLQQNGSFGPTRGPQSNYG
SPYPGAAAFGSQPGPPQPLPAKRLDPDAIPSPIQVIEDDRNNRGSEPFVTGVRGQVPPLV
TTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDH
GESGPLRCNRCKAYMCPFMQFVEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRP
ELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRSGLVRLLCEELKSLLDFLPRE
GGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVGDMFVPLLDGFLVNVNESQAV
ITSLLDQIPEMFADTRETETVFAPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKN
RDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTG
GSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMNNTTD
VELAGLDGDKTVTVEFKHDDRLNEENGALLQCALLYTSCAGQRRLRIHNLALNCCTQLAD
LYRNCETDTLINYMAKFAYRGVLSSPVKTVRDTLITQCAQILACYRKNCASPSSAGQLIL
PECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVAETNVFFYPRLLPLTKS
PIENTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFGVSSFSQITSG
LSVLPVLDNLLSKKVQGLIDSLRAQRSRYMKLIVVKQEDKLETLFKHFLVEDKSLSGGAS
YVDFLCHMHKEIRQLLS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaaccagtcagctccacctgtgccgccgtttgggcagccccagcctgtctac
ctagggcatcatcaatccagctatggtgggcaaccggggtccacaactgcccccacttcc
tatggagcctacaatggcccagtaccaggctatcagcaaacccctcccccaggtgtttca
agagccccaccttcttcaggggcacctccagcctcgacagcacagggcccttgtggccag
actgcatatggccagtttggacaaggagatgtacagaatgggccaagctccactgttcag
atgcagaggctccctgggtatcagccatttgggtcagccatattggcccctgtggtcagc
cagccagctgtgcttcagccctatggccctcccccaacaagtgcacaggtgacggctcag
ctggccggaatgcagatcagtggtactgtggccccagcctctccaccttcagggctaggc
tatggcccaccaacatcgctggcctcagcctcaggaagtttccctaactctggtctgtat
ggctcctatcctcagggccaagctcctccccttggccaggcccagggtcatcctgggacc
cagcctccccagcgatctgtcccactacaggcctccagcttcacacccccagcttcaggg
ggtcctcggatgccttcgatgactggtcctctcttgcctggacagagttttggggggccc
ccagtgagccagcccaaccacgtgtcctcacctgctcctcaagctctgccccctggcacc
caaatgactgggcccccaggaccaccactaccacctatgcactcctcccagcagccaggc
tatcagctgcaacaaaatggttcctttggaccaacccggggccctcagtccaattatgga
agtccctacccaggagcagccgcttttggaagtcagcctgggcctcctcaaccattgcct
gctaagcgcctggaccctgatgccatcccgagccctattcaggttattgaggatgacagg
aacaaccggggttcagagccatttgttactggagtgcggggccaggtgccacccttagtc
accaccaacttccttgtgaaagaccaagggaatgcaagtccccgatacatccgatgcaca
tcctataatatcccttgcacatctgacatggctaagcaggctcaggtgcccctagcagct
gtcatcaagccgctggcaaggctgcccccagaagaggcttcaccatatgttgtcgaccac
ggggaatctggccctttgcgctgcaatcgctgcaaagcatacatgtgccctttcatgcag
ttcgttgagggagggaggcgcttccagtgctgcttttgcagctgtatcaacgatgttccc
ccccagtattttcaacatctggatcataccggcaaacgtgtggatgcttatgaccgtcct
gagctgtccctgggttcttatgaattcttggccactgtagattactgcaagaacaataag
ttccccagccctcctgccttcatcttcatgattgacgtctcctacaatgccatcaggagt
ggtcttgttaggctcctctgtgaggagctcaagtcattgttagacttcctgcctagggag
ggcggggcagaagaatcagcaatccgcgttggctttgtcacctataataaggtgctccac
ttctacaatgtgaagagctcattggcccagccacaaatgatggttgtatctgatgtgggt
gacatgtttgtgccactgctggatggcttcctggtcaatgtcaatgagtctcaagcagtc
atcaccagcttattggatcagattccagaaatgtttgcagacacaagggagacagagaca
gtatttgccccagttatccaggctgggatggaggctctgaaggctgctgagtgtgcaggg
aagctttttctgttccacacctccctgcccattgcagaggccccagggaaactgaagaac
agagacgacaggaagttgatcaacacagacaaggagaagactctgttccagcctcagaca
ggtgcctatcagaccctggccaaagagtgtgtggcccaaggctgctgcgtagacctcttc
ctcttccctaaccagtatgtggatgtggccacgctctctgttgtaccccagctcactggt
ggctctgtctataaatacgcttgctttcaggtggaaaatgaccaggaacggttcctgagt
gacctgcgtcgggatgtacagaaggtcgttggctttgatgctgtgatgcgggtccggaca
agcactggtatccgtgctgtagatttctttggggctttctacatgaacaacacaacagat
gtggagctggctgggctggatggggacaagacggtgactgtggagttcaagcatgacgat
cggctcaatgaagagaatggagccctcctgcagtgtgccctgctctacaccagctgtgca
gggcagcgacggctccgcatccacaacctggccctcaactgctgcactcagctggctgat
ctgtatcgaaactgtgagactgacacgctcatcaactacatggccaagtttgcataccgg
ggggtcctgagcagccctgtgaagactgttcgtgacactcttatcactcagtgtgcccag
atcttggcctgttacagaaagaactgtgccagcccctcctctgcaggacagttgatcctt
cctgagtgcatgaagctactcccagtttacctgaactgtgtattgaagagtgatgtcctg
cagcctggagctgaagtcactactgatgaccgggcctacgtccgacagctggttacctcc
atggatgtggctgagaccaatgtcttcttctatcctcggctcctaccgttgacaaagtct
cccattgagaataccactgaaccaccagcagttcgagcatctgaagagcgtctaagcaac
ggggatatatatttgctggagaatgggctcaaccttttcctctgggtgggagcaagtgtc
caacagggtgttgtccagagcctcttcggtgtctcctccttcagtcagatcaccagtggc
ttgagtgttctgccagttctggataatctactgtccaagaaggtgcaaggcctcattgac
agtttgagggcacagagatcgcggtacatgaagcttattgtggtgaaacaagaggacaag
ctggagacactgttcaaacacttcctggtggaagacaagagcctgagcggcggagcatcc
tacgtggactttctctgtcatatgcacaaggagattcggcagctactgagctag
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