Phocoena phocoena (harbor porpoise): 136135902
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Entry
136135902 CDS
T11058
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136135902 (RRP12)
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
90S particles
Other 90S particles
136135902 (RRP12)
Pre-60S particles
Other pre-60S particles
136135902 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
136135902
NCBI-ProteinID:
XP_065749814
LinkDB
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Position
16:30318229..30345912
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AA seq
1234 aa
AA seq
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MGRSGKLPSGVSAKLKRWKKGHSSDSNPAISRHRQAARSRFFSRPSGKSDLTVDAVKLHN
ELQSGSLRLGKSEAPETAMEEEEVAPALTEKSSGTFLSGLSDCTNVTFSKVQRFWESSSA
AHKEICAVLAAVTEVIRSQGGKETETEYFAALVLSCLATLLRKQDLEAWSYPVTLQVYHG
LLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFGEKAPAHHPAAMSTAKFCIQEIEKSGGSK
EATTTLHVLTLLKDLLPCFPDGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLFHAKPSP
GTLPAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLHRDLGLGHLPRLFGT
ATTCLLSPHSQVVTAATQCLQEILKECVAPHMADIGSVTSSASGPAQYVAKMFRAVEEGL
TYRFHASWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPYSPHMAALDRAVGAAV
ASMGPEVVLEAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTAYFLPLATTLKRK
AMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVATAFKGLARTLGTAISERPDLRV
TVCQALRTLITKGCEAEADRAEVSRFAKNFLPILFNLYGQPIAAGDTPAPRRAVLETIKT
YLTITEPQLVNGFLEKASEKVLDPASSDFTRLSVLDLVVALAPRADEAAISKLYSTIRPY
LESKAHGVQKKAYRVLEEVCASPQGPGARFVQSHLDDLKKTLLDSLRSTSSPAKRPRLKC
LIHIVRKLSAEHEEFISALVPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGPDPAEAL
QRYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGASTMEQLLENVCLLLASRTRDVV
RSALGFIKVSMVVMDMAHLAKHMQLVMGAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFEL
VRKLLPEEYQKVLVNIRKAEARARKQRALSQAAAEEEVEEEEPFRGKGDSIEEILADSED
EEDEEEERSRGKEQQRLARQRGRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGKKKD
HGFKVSADGRLIIREEEDGDAKMEEEEGAKGEDEEMADLMEDVGVRSKKHQKLKQKEADS
EELEMPPQYQAGGSGIHRPVAKKATPGAEYKAKKAKGDMKKKGRLDPYAYIPLSKTKLNR
RKKVKLQGQFKGLVRAAQRGSQVGHKLRRKDQRS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgttcggggaagttgccctccggggtctcggccaagttgaaacgctggaagaaa
ggccacagcagcgacagcaacccggccatctcccgccaccgccaggccgcccgcagccgc
ttcttcagccggccctcaggaaagagcgacttgacagttgatgcggtaaagttgcataat
gagctgcagtcaggatccctgcgtctgggtaaaagcgaagcccctgagactgccatggaa
gaggaagaggtggcgccagctctcaccgagaagtcttcgggcaccttcctgagcggcctc
tccgactgcacaaacgtcaccttcagcaaagtgcagcgcttctgggagtccagctcggct
gcccacaaagagatctgtgctgtcttggctgctgtcaccgaggtgatacgctcccagggt
gggaaggagacagagactgagtactttgctgccctggtcctctcctgcctggccaccctt
ctgcggaagcaggacctggaggcctggagctaccccgtgaccctgcaggtgtaccatggg
ctgctgagtttcactgtgcaccccaagcccaagatccggaaggctgcccagcatggagtg
tgctccgtcctcaagggcagtgaattcatgtttggtgaaaaggcccctgcccatcaccct
gctgccatgtccactgccaagttctgcatccaggagatcgagaagtctggaggctccaag
gaggccaccaccacgctgcacgtgctgaccctgctgaaggacctgctgccctgcttcccg
gacggcctggtgaagagctgcagtgagactctcctccgggtcatgactttgagccacgtg
ctggtgacagcctgtgccatgcaggcctttcacagcctcttccatgccaagccaagcccg
ggtaccctgccagcagagctcaacgcccagatcatcacggccttgtacgactacgttccc
agcgagaatgacttacaacccctgctggcctggctgaaggtcatggagaaagcccacatc
aacctggttaggttgcatcgggacctgggactgggccacctccctcgcttgtttggaact
gcgacaacctgcctcctctccccccactcgcaggtggtgacagctgccacccagtgcctt
caggagatcttgaaggagtgtgtcgctccccacatggctgacatcggctccgtgacctcc
tcggcctcaggccctgcccagtatgtcgccaagatgttcagggcagtggaggagggcctg
acatacagattccacgcatcatggagctccgtgctgcagctgctgtgtgtcttctttgag
gcatgtgggagacaggcccatcccgtgatgaggaagtgcctccagtccctgtgtgacctg
cgcctctccccctactccccccacatggcagctctggaccgcgcagtgggcgctgccgtg
gccagcatgggccccgaggtggttttagaggctgtgcctttggaaattgatggctctgaa
gagactctggatttccctcggagctggctgctgcctgtcatccgagaccatgtccgggaa
actcgacttggtttctttaccgcttacttcctgcctctggccaccaccctgaagaggaaa
gcaatggacctggcccaggcaggcagcacagtggagtccaagatctacgacacgctccag
tggcagatctggaccctcctgcctgggttctgcacgaggcccacggatgtggccaccgcc
ttcaaagggctggcgcggacgctgggcacggccatcagtgagcgcccagacctgagggtc
actgtgtgccaggccctgcgcaccctcatcaccaagggctgtgaggcggaggccgaccgt
gctgaagtgagccgctttgcgaagaactttctgccgatcctgttcaacttgtacgggcag
cccattgcagctggagacaccccagcccctcgccgggccgtgctggaaaccatcaaaact
tacctcaccattactgagcctcagttggtgaatggtttcctggaaaaagccagtgagaag
gtgctggaccctgctagctctgacttcaccagattgtccgtcctggacctggtcgtggcc
ttggctccccgcgctgatgaagctgccatcagcaagctgtactccaccatccggccctac
ctagagagcaaggcccatggggtacagaagaaggcctaccgcgtgctggaggaggtgtgc
gccagcccccagggccctggcgcccgcttcgtgcagagccacctggatgacctgaagaag
acccttctggactcgctacggagcacctcctcgcccgccaagaggccccgtttgaagtgc
ctcatacatatcgtgaggaagctctccgccgagcatgaggagttcatcagtgccctcgtc
ccggaggtgatcctctgcaccaaggaggtgtcggtgggagctcggaagaatgcttttgcg
ctgctggtggagatgggccacgccttccttcggtttggcccagacccggcagaggccctg
cagcgctacctcgtcctgatctaccccggtctcgtgggcgctgtgaccatggtcagctgc
agtatcctggccctgacccacctccttttcgagtttaaaggtttgatgggggccagcacg
atggagcagctgctggagaatgtgtgcctgctcctggcctcccgtacccgcgacgtggtc
agatcagcactgggcttcatcaaggtgtcaatggtcgtcatggacatggcacacctggcc
aagcacatgcaactggtgatgggagccatcgggaagctctcggacgacatgcggcggcac
ttccgcatgaagcttcggaacctgttcaccaagttcatccgcaagttcgggttcgagctg
gtgaggaagctcctgccagaggagtaccagaaagtcctggtgaacatccggaaagcagag
gcccgggccaggaaacagcgggccctgagccaggccgcagcggaagaggaggtggaggag
gaggagcccttccggggcaaaggtgacagcatcgaggagattttggctgactcggaggac
gaggaggacgaggaggaggagaggagtcggggcaaggagcagcagaggctggcccgccag
aggggccgcgcgtggctgaaggagggtggcggggacgagcccctcaacttcttggacccc
aaggtggcccagcgagtcctggccacccagcctgggccaggtcggggcaagaagaaggac
cacggcttcaaggtgagcgccgacggccggctgatcatccgtgaggaggaggatggcgac
gccaagatggaggaagaggaaggcgctaaaggggaggatgaagagatggctgacctgatg
gaagacgtgggcgtcaggagtaaaaagcaccagaagctcaagcagaaagaggctgacagt
gaggagctggagatgccccctcagtaccaagcgggaggctctggcatccatcgccctgtg
gccaagaaggctacccccggggccgaatacaaggccaagaaagcaaagggtgacatgaag
aagaaaggtcggctcgacccctacgcctacatccccctcagtaaaaccaagctcaaccgc
aggaagaaggtgaagctgcagggacagttcaaaggcctggtgagagctgcccagcggggc
tcccaggtgggacacaagctccgcagaaaggatcaacggtcctga
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