Phocoena phocoena (harbor porpoise): 136135905
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Entry
136135905 CDS
T11058
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04110
Cell cycle
pphc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136135905 (SMC3)
04114 Oocyte meiosis
136135905 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136135905 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pphc00535
]
136135905 (SMC3)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
136135905 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
136135905 (SMC3)
Proteoglycans [BR:
pphc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
136135905 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
136135905
NCBI-ProteinID:
XP_065749828
LinkDB
All DBs
Position
16:complement(19264998..19297073)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNNVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttatagagatcaaacaattgta
gatcccttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgagtttagccatcttcgtccagaacag
agattggctttgttacatgagggtacaggacctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccggttgccaatcgacaaagaggaagtttcacttagaaga
gttattggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttactatattgttaaa
caaggaaagatcaaccagatggcaacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtgtatgatgaacgaaaagaagaaagcatctctttaatgaag
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcagaagtgggataagatgaga
cgagccctggaatacaccatttacaatcaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccaggcaattaagagatgcccag
caggatgcaagagataaaatggaggatattgagcgccaagttagagaactgaaaacaaag
atttcagctatgaaagaagaaaaggagcagctcagtgctgaaagacaagaacaaattaag
cagaggactaagttggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacagaggaaacgcttattaaaagaaaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacaatgtaaaagaaaaagaagagcga
ggaattgctagattggcccaagctacgcaggaaagaacggatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatctggagcagtataataaactggatcaggat
cttaatgaagtcaaagctcgagttgaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcacttgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagctgca
acaggaaaggccattttaaatggaatagatagtataaacaaagtgctagaccacttccgt
cgaaagggaataaaccagcatgttcaaaatggctatcatggtattgtgatgaataacttt
gaatgtgagcctgctttttacacgtgcgtggaagtcactgctggaaataggttgttttat
cacattgttgattcagatgaagtcagcacgaagattttgatggagtttaataaaatgaac
ctacctggagaggttacttttctgcctcttaacaaattagatgtaagggatactgcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttggaaaaacacttatttgtcgtagtatggaagtttcaacc
cagttggcccgtgctttcactatggactgcattaccctggaaggtgaccaagttagtcat
cggggtgctttaactggaggctattatgatacaaggaagtctagacttgaattacaaaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaatctg
cgcagaaatattgaaaggattaataatgaaattgatcagctgatgaaccaaatgcagcag
atagagactcagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgttaaaagagaagaggcagcagtcagagaaaacctttatgcccaagcaacgtagctta
caaagtttggaggcaagtttgcatgctatggagtccaccagagaatcgctgaaagcagaa
cttggaactgatttgctttctcaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacagttgctaaatgaaagaattaag
ttagaaggtattattactcgagtagagacttacctcaacgagaatttaagaaagcgcttg
gaccaagtagaacaggaactcaatgaactgagagagacagaagggggtactgttctcact
gctacaacctcagaacttgaagccatcaataaaagagtaaaagataccatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggagttgcagaaaagt
atggagcgctggaaaaatatggaaaaagaacacatggatgctataaatcatgacactaaa
gaactagaaaagatgacaaatcgacaaggcatgctactgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttccccaggaagcatttgaaaaataccaaacgctg
agcctcaaacagttgtttcgaaaacttgaacaatgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctctgagcagaaagaaaagtta
ataaagcggcaagaagagttggatagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatatgaagctattcagttgactttcaaacaggtatccaaaaacttc
agtgaagtattccaaaagttggtacctggtggcaaagctactttggtgatgaagaaagga
gatgtggaaggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggc
tctgggtcacaaagcagtgttccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcaggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggctgtgtcagatatg
attatggaacttgctgtacatgctcaatttattacaactacttttaggcctgaattgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgataccactcatggttaa
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integrated database retrieval system
