Phocoena phocoena (harbor porpoise): 136135994
Help
Entry
136135994 CDS
T11058
Symbol
SEC31B
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31B
KO
K14005
protein transport protein SEC31
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136135994 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136135994 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pphc02044
]
136135994 (SEC31B)
Membrane trafficking [BR:
pphc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
136135994 (SEC31B)
Secretion system [BR:
pphc02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
136135994 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
SRA1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
136135994
NCBI-ProteinID:
XP_065749966
LinkDB
All DBs
Position
16:27812689..27839333
Genome browser
AA seq
1056 aa
AA seq
DB search
MKLKELEWPAVQVWSPASHYCLFLCLGTSAQQLDASFSTDGILEIFEVDFRDPSLDLECK
GVLSPSSRFHKLIWRSFGNGLLEGSGVIVGGGDDGMLTLYSVTHILSSGKEPVITQIQKH
TGAVRALDFNPFQGNLLASGANDSEIFIWDLNNLSVPMTPGSKSQQPPEDIKALSWNRQV
QHILSSAHPSGKAVVWDLRKNEPIKVSDHSNRMHCSALAWHPDMATQLVLCSEDDHLPVI
HLXDLCFASSPLKVLESHSRGILSVSWSQAEXSAKDNQILCWNLESSEVVYKLPTLSSWC
FDAQWCPWDPPVFSAAFFDGXISLYSVMGRSWEVQQMRQADKISSSFSKVQHLPPLQVPE
QVAQASLISPLEKNPKWMRRPAGVSFAFGGKLVTFGLPSTRAHQVPQPCLRLVFISQVTT
EPEFLMRSSELQEGLGSGNLLNXSQNKIQQASLESEKMLWQFLKVTLEKDSRMKFLKLLG
YNKGELQKKVATXLKSDLGLGESPQPKGVDLNSNRQQAFCIQVRRKRSTGKLCHLRSFCL
STDMLGTHMEQEGGRALTSEARLCYVCSGSVERLVECWAKCPRASSPMALQDLMEKVVVP
NRSLKLLRGADGVSPGPATTYRIAQYANLLAAQGSLVTAMSYLPSDSAQPPIQQLRDWLF
HAQGSGVLGQQSPPFPFPRVIVGAAPHSQETSSPRLGFQSSHQVSSPSPRPRIFTPPSSL
VIPLTPSCPSPYQGSRMQNTSDYRPSGFQEAQSLPVVPGVRPALSQLRLSGGQRVQAPNP
VGFPGTWPLPGPPTAPPDIMQAGSASLPETPQRLPLLPVRAPGFNPMSSQPPAPPVTFSA
AHPPGGPGAPCADTFPTTGILTPQPGPQDSLENAPVPRGNLQRKELPETFMPPAPITAPV
MCLTPEPRGVLSSQSAVPSVSHAPPGAPGELSLXQLQLPPAKMDRKELPPEHQSLNISFE
ALLQRCSLSATDIKTKRKLDEAAQRLECLYEKLCEETLSPPVLAGLHEVAQCVDAGRFER
GLAVHAQVVSCSSFSEVSSFMPVLKSVLTIAYKLHI
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaacttgagtggcccgctgtccaagtgtggagcccagctagccactac
tgtcttttcttgtgtctaggaacatctgcccagcagctagatgcctcctttagtacagat
ggcatattggaaatctttgaggttgatttcagggacccctctctggacttggaatgcaag
ggagtcctttctccctccagcaggtttcacaagctgatctggaggagctttggcaacggg
cttctggaaggctccggggttattgtaggcggcggggatgatggcatgcttactctatac
agtgtgacccacatcctgtcttcgggaaaggagcctgtgattacccagatacagaagcac
acgggggctgtcagagcccttgactttaatccgttccagggcaacctcctggcctcaggg
gccaatgattcagaaatcttcatttgggatttgaataacctgagtgtgccaatgacccca
ggatccaagtcacagcagcccccagaagacatcaaggcactctcttggaaccgtcaagtt
caacacattctgtcttctgctcaccccagtggcaaggcagtcgtgtgggatctcaggaag
aatgaacctatcaaagtcagtgatcacagcaacaggatgcactgctcagccctggcctgg
cacccagacatggccacccagttggtgctatgttcagaagatgatcatcttccagtaatt
catctgnntgacttgtgctttgcctcctcacccctgaaggtgctggagagtcacagcagg
gggatcctgtcagtgtcatggagtcaggctgagnntagtgccaaggacaaccagatcttg
tgctggaacctggagagcagtgaggtggtgtataagctacccacactgagcagctggtgc
tttgatgcgcagtggtgcccttgggaccctccagtgttctctgctgccttcttcgacggc
tgaatcagtttatactctgtgatgggtaggagctgggaagtccagcagatgagacaggct
gacaagatctcttcttcctttagcaaagtccagcatctcccaccattgcaggtgccagag
caagtggcccaagcatcattgatatctcccctggaaaaaaaccccaaatggatgagaagg
ccagcaggtgtctcatttgcttttggggggaagctggttacctttggcctccccagcacc
cgtgcccatcaggtgccacagccttgcctccgcctagtcttcatcagtcaggtcaccaca
gaacctgaattcctcatgcggtcatctgagctgcaggagggcctgggatcaggaaatctc
ctgaatnntagtcagaacaagatccagcaagcatcactggaaagcgaaaagatgctctgg
cagttcctgaaagtgaccttagagaaggactccagaatgaaattcctaaaactattagga
tacaataaaggtgaacttcagaagaaggtggccacatagttgaagagtgatttggggctg
ggtgagagccctcagcccaagggagttgacctcaacagtaacagacaacaggccttttgc
atccaggtgcggaggaagaggagcacagggaagctgtgccatttaagaagtttctgtctc
tctacagacatgctgggaactcacatggagcaggagggtggcagggcactaacttctgaa
gccagactctgttacgtgtgctcaggaagtgtggagcggctggtggagtgctgggcaaaa
tgcccccgggcttcatcccccatggctctacaggacctgatggagaaggtggtggtccct
aacaggagcttgaagctactgcggggtgctgatggggtgagcccaggccctgccacaacc
tacagaatcgctcagtatgccaacctcctggcagcccagggcagcctggtcactgccatg
agctacctacccagtgacagtgctcagccaccaattcagcagctgagagattggcttttt
catgcccagggttctggtgtcttgggccagcagtctccccctttcccctttccccgggtt
attgtgggagctgctccccactctcaagagacatcatctcccagactgggattccagtct
tctcaccaggtttcatctccatctccaaggccaaggatttttacacctccgtcatcactt
gtgattcccttgacaccttcctgtcctagcccttatcagggctccagaatgcagaataca
agtgactacaggccatctgggttccaggaagcccagtctttgcctgtggtccctggggta
aggcctgctttatctcagctgcggctgtcaggagggcaaagggtgcaagctcctaacccc
gtgggattccctggaacatggcctcttcctggtccacccacggcacccccagacattatg
caggctggttctgcctccctgcctgagactcctcaaaggctccctctgcttcctgtgaga
gcaccaggcttcaaccctatgagctcccagccgccagcccctcctgtcaccttctctgca
gcacaccctccaggagggccaggtgctccatgcgccgataccttcccaaccactggcatc
ttgactcctcagccaggacctcaagattccttggaaaatgctccagtgcccaggggaaac
ctccagaggaaagagttgccagagacattcatgcccccagcaccaattactgctccagtt
atgtgcctcacccctgagccacgaggggtcctttcctcacagtctgctgtccccagtgtg
agtcatgctccccctggagccccaggagaactgagcctgtagcaacttcagctgccacct
gcgaagatggacaggaaggagctgccccctgaacatcagtccttgaatatcagctttgag
gcgcttctgcagcgctgctccctgtctgccactgacataaagacaaaacggaagctggat
gaagcagcccaacgtctagaatgtctatatgagaagctctgcgaagagacactctcgcct
cctgtcctggctgggctccacgaggttgcccaatgtgtggacgcaggacgctttgagcgg
ggcctcgctgtgcatgctcaggtggtgagctgcagcagcttcagcgaggtctccagcttc
atgcctgtcctgaagtccgtcctcaccatcgcttataagctacacatctag
DBGET
integrated database retrieval system
