Phocoena phocoena (harbor porpoise): 136136052
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Entry
136136052 CDS
T11058
Symbol
AGO1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136136052 (AGO1)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136136052 (AGO1)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136136052 (AGO1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136136052 (AGO1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136136052 (AGO1)
microRNA pathway
RISC loading complex
136136052 (AGO1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
136136052
NCBI-ProteinID:
XP_065749998
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Position
1:28735725..28771476
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AA seq
857 aa
AA seq
DB search
MEAGPSGAAAGTYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgggaccctcgggagcagctgcaggcacctacctgccccccctgcagcaggtg
ttccaggcacctcgccggcctggcattggcaccgtggggaaaccaatcaagcttctggcc
aactactttgaagtggacatccctaagattgacgtctaccactacgaggtggatatcaag
ccggataagtgtcctcgcagagtcaaccgggaagtggtggaatacatggtccagcatttc
aagcctcagatctttggtgatcgcaagcccgtgtatgatggaaagaagaacatttacact
gtcacagcactgcccattggcaatgaacgggttgacttcgaggtgacaatccctggggaa
gggaaggatcgaatcttcaaggtctccatcaagtggctagccattgtgagctggcgcatg
ctgcatgaggccttggttagtggccagatccccgttcccctggagtctgtgcaagccctg
gatgtggccatgaggcacctggcatccatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaggcgcagccagtgattgagttcatgtgtgaggtgctggacatcaggaac
atagatgagcagcccaagcccctcacggactctcagcgtgtgcgcttcaccaaggagatc
aagggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgtgtgtgt
aatgttacccgccgccctgccagccatcagacgtttcctttgcagctggagagtggacag
actgtggagtgcacagtggcacagtatttcaagcagaaatataaccttcagctcaagtat
ccccacctgccctgcctgcaagttggccaggaacaaaagcatacctacctgcccctagag
gtctgtaacattgtggctgggcagcgctgcattaagaagctgactgacaaccagacttca
accatgataaaggctacagctagatctgccccagacagacaagaggagatcagccgcctg
atgaagaatgccagctacaacctagatccctacatccaggaatttgggatcaaggtgaag
gatgacatgacggaggtgacggggcgagtgctgccggcgcccatcttgcagtacggcggc
cggaaccgggccattgcgacacccaatcaaggtgtctgggacatgcgggggaaacagttc
tacaatggaattgagatcaaagtctgggccattgcctgcttcgcaccccaaaaacagtgt
cgagaagaggtgctcaagaacttcacagaccagctgcggaagatttccaaggatgcaggg
atgcccatccagggccagccttgcttctgcaaatatgcgcagggggcagacagcgtggag
cccatgttccggcatctcaagaacacctactcagggctgcagctcattatcgtcatcctg
ccagggaagacgccagtgtatgctgaagtgaaacgtgttggagatacactcttgggaatg
gctacacagtgtgtgcaagtgaagaatgtggtcaagacctcgcctcagactctgtccaac
ctttgcctgaagatcaatgtcaaacttggtggcattaacaacatcctagttccacaccaa
cgctctgctgtctttcaacaaccagtgatattcctgggagcagatgttacacacccccca
gcaggggatgggaaaaaaccttctatcacagcagtggtaggcagtatggatgcccacccc
agccgttactgtgctactgtgcgggtgcagcgacctcggcaggagatcattgaagacttg
tcctacatggtacgtgagctgctcatccagttctacaagtccacccgcttcaagcctacc
cgcatcatcttctaccgagatggggttcctgaaggccagctcccccagatcctccactat
gagctgctggccattcgtgatgcctgcatcaaactggaaaaggactaccagcccgggatc
acttatattgtggtgcagaaacgccatcacacccgccttttttgtgctgacaagaatgag
cgaattgggaagagtggtaacatcccagctgggaccactgtggacaccaacatcacccac
ccatttgagtttgacttctatctgtgcagccacgcaggcatccagggcaccagccgacca
tcccattactatgtcctttgggatgacaaccgtttcacagcggatgagctccagatcttg
acgtaccagctgtgccacacttatgtacgatgcacacgctccgtctcaattccagcacct
gcctactatgcccgcttggtggctttccgggcacgataccacctagtggacaaggagcat
gacagtggagaggggagccacatatcggggcagagcaatgggcgggacccccaggccctg
gccaaagccgtgcaggttcaccaggatactctgcgcaccatgtacttcgcttga
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