Phocoena phocoena (harbor porpoise): 136136092
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Entry
136136092 CDS
T11058
Symbol
TDRD1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136136092 (TDRD1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
136136092 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
136136092
NCBI-ProteinID:
XP_065750051
LinkDB
All DBs
Position
16:complement(15960706..15995793)
Genome browser
AA seq
1059 aa
AA seq
DB search
MMSRNNLEASSCKMTEPFNFEKNESKLPPHESLRSTGGHPNHPNFRLKSPENGNKKKNFL
LCEQTKQYLASQEDNSVSSNSSGISGEVAGSEGDRTMLPTGNSVSPLNVGNNSPPKEVNS
KTSNNVSPAKSKKVHQLVESSLSINDPALFSSLGPPLQSTTCHCCGLFGPLRCSQCKQTY
YCSVACQRRDWAAHSIVCKPVQQNFHKLEDNKSPFETKNMEVKKESDCPLGVTKEIAICA
DKIMFSDLRSLQLRKSMEIKGIVTEFKHPGDFYVQLRSSEVLEYMNQLSASLKETYANKA
HEEDYIPVKGEVCVAKYTVDQTWNRVIIQDVDVLQKKAQVLYIDYGNEEIIPVNRIHQLN
RKIDLFPPCAIKCFVANVIPAEGNWSNDCIKTIKSLLMQQYCSLKVVDILKEVISFAVDV
MLTSSGKFLDHVLIEMGYGLKPKGQNSKKQSADSSDLEDVRKITAENKTIIDRSGLIPKV
LTLNVGDEFCGVVAHIQTPEDFFCQRLQSGHKLAELQASLTAYCSQVSPRSDFYPTIGDI
CCAQFSGVKPSLGIWTPEAIYLMRKIVQNKMITVKVVDQLENSSLVELMDRSVMPHISVT
RVLIDAGFAVGDKGVVTVKPSDMKEASVPSGVEAEISLLEWTWVELAVDQTVDVVVCVVY
SPGEFYCHVLKEDALKKLSDLNKLVAEYCQQKLPNNFKAEVGQPCCAFFVDIQPRNKHWT
REAIARFQTCVTGIKLQARVAEITENGVGVELTDLSTSYPRIITDVLIEEHLVLKASSPC
KDLVKNSPVNKHGLQIDAPWLQATSSAEQWRTIELPVNKTVQASVLEIVNPNLFYALPNE
MPEDQEKLCVLTAELLEYCSAQKSRSAYRPKIGDACCARYTGDDLWYRAVVLGMSAADVK
VLYADYGNIETLPLCRVQPISASYLELPFQIIKCSLEGPMELNGSCSQLIIELLKNLMLN
QNVMLSVKGFIKNVHAVSVEKCSENGTINIADKLVMYGLAKNVTSEKQSALNKEKGNRMN
CCCTELQKQVEKHEQILLFLLNNPTNQNKFTEMKKLLKS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaagaaataatttggaggcatctagctgtaaaatgacagagccatttaatttt
gagaaaaatgaaagcaagcttccaccgcatgagtctttaagaagtaccggaggacatcct
aaccatcctaatttcaggttgaaaagcccagagaatggaaataaaaagaaaaattttttg
ctttgtgagcaaaccaaacagtatctggctagtcaggaggacaattcagtatcttcaaac
tctagtggcatcagtggagaagtggctggatccgaaggagacaggacgatgctgccaaca
ggtaactctgtgtcaccattaaatgttggaaataattcaccacccaaagaagtaaatagt
aagactagcaataatgtgtctcctgcaaaatcaaaaaaagtacaccagttggttgagagt
tccttgtccataaatgatccagcactcttcagctcattaggacctcctcttcagtcgaca
acttgccattgctgtggtctgtttgggccgctgaggtgctcacagtgcaagcagacgtac
tactgctctgtcgcatgccagagaagggactgggcagcccacagcatcgtgtgcaaacct
gttcagcagaatttccacaaacttgaagataataaatcaccttttgaaacaaagaacatg
gaagtgaaaaaagagagtgactgtcctcttggagttactaaagaaatagccatttgtgct
gataaaataatgttttctgatttgagaagcctacaactcaggaaaagcatggaaataaag
ggtatagttactgaattcaaacacccaggtgacttttatgtgcagttacgttcttcagaa
gttttagaatacatgaaccaactgtctgcgagcttaaaggaaacatatgcaaataaggca
catgaagaagattatattcctgtaaagggggaagtttgtgttgccaagtacactgttgat
cagacctggaacagagtaataatacaagatgttgatgtgctgcagaagaaggcacaagtc
ttatatattgattatggaaatgaagaaataattccagtaaacagaattcaccaactaaac
agaaaaattgacttgtttcctccttgtgccataaaatgctttgtagccaatgttatccca
gcagaggggaattggagcaatgattgtatcaaaactattaaatcactgttaatgcagcag
tactgctctctgaaggttgtggacatcttaaaagaagtgatttcctttgctgtggatgtt
atgctgacaagttcaggaaaattcttagaccatgtgctcatagaaatgggatatggcttg
aaacccaagggacaaaattctaagaagcaaagtgcagattcaagtgatcttgaagatgtc
aggaaaatcacagctgaaaacaaaactattatagacagaagtggcctaatccccaaagtg
ttgactttgaatgtaggtgatgagttttgcggtgtggtcgcccacattcagactccagaa
gacttcttttgtcaacgactacaaagtgggcataagctcgctgaacttcaggcgtcactt
actgcgtactgcagtcaagtgtctccacgctctgatttttatccaaccattggtgatatc
tgctgtgctcagttctctggagtaaagccatcattaggaatttggactccagaagctatt
tatctgatgagaaaaattgtacagaacaaaatgatcacagtgaaagtggtggaccagttg
gaaaacagttccctggtggaacttatggataggtctgtgatgccccacatcagtgtcacc
agagtgctcatcgatgcaggctttgccgtgggggacaagggggtagtgacagttaagccc
agtgacatgaaagaagccagtgttccctcgggtgtagaagcagaaatcagtctgttggag
tggacgtgggttgaacttgctgttgatcagacagtagatgttgtggtctgtgtggtgtat
agtcctggagaattttactgccatgtgcttaaagaggatgctctaaagaaactcagtgac
ttgaacaaattggtagcagaatattgccagcagaagttgcctaataattttaaggcagaa
gtagggcaaccttgttgtgctttttttgtagatatacagcctagaaacaaacactggacc
agagaagccatagcaagatttcagacgtgtgtcacagggataaaactccaagcccgagtg
gctgaaatcactgaaaatggagtgggagttgaactcaccgatctttccacttcttatccc
aggataattactgatgttctgattgaagaacatctggttttaaaagctagttcaccatgt
aaagacttagtgaaaaacagtcctgttaataaacatggtcttcaaattgatgccccatgg
cttcaagccacctcttcagctgagcagtggaggacaatagaattgccagttaataaaact
gtacaggcaagcgtattagaaattgtaaacccaaacttgttttatgctctaccaaatgaa
atgccagaagatcaggaaaaactgtgtgtattgacagccgaattgttagaatattgcagt
gctcagaaaagtcgatcggcctatagaccaaaaattggagatgcgtgctgtgccagatac
acaggtgatgatttatggtaccgtgccgttgttctggggatgtcagctgctgatgtgaaa
gtgctctatgcagactatggaaacattgaaactctgcctctttgcagagtgcagccaatc
tctgccagctacctggagcttcctttccaaattattaaatgttcccttgaaggaccaatg
gaattgaatggaagctgttctcaattaataatagagctactgaaaaatttaatgttgaat
cagaatgtaatgctttctgtaaaaggatttatcaagaatgtccacgcagtgtcagttgag
aagtgttctgagaacggtactatcaatatagctgataagctggtgatgtatggtctggcg
aaaaacgtcacatctgaaaagcaaagtgctttaaataaagaaaaggggaacaggatgaat
tgctgctgcacagagctacagaaacaagttgaaaaacatgaacagattcttctcttcctc
ttaaacaatccaaccaatcaaaacaaatttactgaaatgaaaaaattgttaaaaagttaa
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