Phocoena phocoena (harbor porpoise): 136136119
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Entry
136136119 CDS
T11058
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136136119 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136136119 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
136136119 (PDLIM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
DUF8106
Motif
Other DBs
NCBI-GeneID:
136136119
NCBI-ProteinID:
XP_065750135
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All DBs
Position
16:32197312..32243400
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AA seq
329 aa
AA seq
DB search
MTTQQIALQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAATANLCVGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSPAPRVITNQYNNPAGLYSSENISNFNNALESKTAASGQEMNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVITVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcagcaaatagcgctccagggcccgggaccgtggggcttccgcctcgtgggg
ggcaaggacttcgagcagcctctcgccatttcccgggtcactcccggaagcaaggctgct
acagctaatttatgtgttggagatgtaatcacagccatcgatggggaaaataccagcaat
atgacacacttggaagctcagaacaaaatcaagggctgcacagacaacatgactctcaca
gtaaccagatctgaacagaaaatctggtctcctctggtgacagaggaagggaaacgtcac
ccatacaagatgaatttagcctctgaaccccaagaggtcctacacataggaagcgcccac
aaccggagtgccatgccctttaccgcctcacctgcctccagccctgcccccagggtcatc
acaaaccagtacaacaacccagctggcctctactcctctgaaaacatctccaacttcaac
aacgccttggagtcaaagacggcagccagcgggcaggagatgaatggcagagccttagac
cattctcagcttccaagcggacttgtcattgacaaagaatctgaagtttacaagatgctt
caggagaaacaagagttaaatgagcctccgaaacagtccacttcattcctggttttgcag
gaaatcctggagtctgaggagaaaggggatcccaacaagccctcaggattcagaagtgtt
aaggctccagtcaccaaagtggctgcatcgattggaaatgcccagaagctgcccatgtgt
gacaagtgtggcaccggcattgtcggcgtgtttgtgaagctgcgggaccgtcaccgccac
cctgagtgttacgtgtgcaccgactgtggcacgaacctgaaacagaagggccatttcttt
gtggaggatcagatctactgtgaaaagcacgcccgggagcgggtcactccacccgagggc
tacgatgtgatcactgtgttccccaagtga
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