Phocoena phocoena (harbor porpoise): 136136246
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Entry
136136246 CDS
T11058
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136136246 (SORCS3)
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Others
Others
136136246 (SORCS3)
Endosome - Lysosome transport
136136246 (SORCS3)
Endosome - Golgi transport
136136246 (SORCS3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
136136246
NCBI-ProteinID:
XP_065750371
LinkDB
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Position
16:complement(23614624..24209851)
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AA seq
1222 aa
AA seq
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MEAARTERPAGWPRAPFARTGLLLLSTWVLAGAEITWDATGGPGRLAALASRSPALPPLS
LRAVASQWPEGLASVRRGAALGRRPGPEPLPQPGGGSSRKKLGEAGGLLPAGAQWGRGIS
APGKTGGTRRSRRAQSPSALERGDTQATVLADGSKGSRSLAKGLREEVKAPRAGGSAAEE
LRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTY
EKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFYIQSL
LFHPKQEDWVLAYSLDQKLYSSMDFGRRWQLMHERITPNRFYWSVSGLDKEADLVHMEVR
TADGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSYRRE
AFTQIKLPKYSLPKDMHIISTNENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKS
SRGLMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVH
CLLPFCSLHLHLQISENPYSSGRISSKETAPGLVVATGNIGPELSYTDISVFISSDGGNT
WRQIFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWNKYGFTSVPLFVDGALV
EAGVETQIMTVFGHFSLHSEWQLVKVDYKSVFSRRCSKEDYETWRLLNQGEPCIMGERKI
FKKRKPGAQCALGQDSSGTVVSEPCVCADWDFECDYGYERRGESQCVPAFWYNPASPSKD
CSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQICPGKAPHGLHVVTTDGRLVAEQGHN
ATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEEGIKHVYKSAGIFQVTAYAENNLG
SDTAVLFLHVVCPVEHVHLRVPFVAIRNKEVNISAVVWPSQLGTLTYFWWFGNSTKPLIT
LDSSISFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDYHNPDIPE
WRQDIANVIKRALVKVTSIPEEQILVAVFPGLPTSAELFILPPKNLTERRKGNEGDLEQI
VETLFNALNQNLVQFELKPGIQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAV
FLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRV
IGGIATIANSESTKEIPNCTSV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgcgcacggagcgccccgcaggctggccccgggcgcccttcgcccggacc
gggctcctgctcctgtcgacgtgggtcctggccggcgccgagatcacttgggacgcaacg
ggcggtcctgggcgcctcgcggctctggcttcgcggtccccggcgctgcctcctctctcg
ctgcgggcagtggcaagccagtggccggagggtctggcgagtgtacggagaggcgccgca
ctggggcgccggccgggaccagagccactgccccagccaggcggaggcagcagcagaaag
aagctgggagaagccggagggctgttgccggcaggcgcgcagtggggacggggcatctcg
gctcctggcaagactggcggtacaaggaggagtcgccgggcgcagtcccccagtgccctg
gaacgcggagacacccaggctactgtcttagccgatggttccaaaggaagccggtctctg
gccaagggtctccgggaggaggtgaaggcaccacgggctggggggtcggcggccgaagag
ctccggctacccagcacctcgttcgcgctgaccggggactcggcccacaaccaagccatg
gtgcactggtcgggacacaacagcagcgttatactcatcctgacgaagctgtatgacttc
aacctgggaagcgtgacagagagctcactttggagatcaacggattacggcaccacctat
gaaaagctcaatgacaaagtgggcttgaagactgtcctcagttacctctacgtcaatccc
accaacaaaagaaagatcatgcttcttagtgatcctgagatggagagcagtatactgatc
agctccgatgaaggggccacctatcagaaataccggctcaccttctatatccagagtctg
ctcttccaccccaagcaagaggactgggtgctggcctacagtctggatcaaaagctctac
agctccatggacttcgggagacggtggcaactcatgcatgaacgcatcacacccaacagg
ttttactggtcggtgtccggattggataaagaggcggacttggtgcacatggaagtgcgg
acagctgatggatatgctcactacctcacctgcaggatccaggaatgtgctgagactact
cggagtgggccttttgcccgctccattgacatcagttccctggtcgtccaggatgaatat
atcttcattcaggttacaactggcggaagagccagctactacgtgtcttaccgaagagaa
gccttcactcagataaagctgcccaagtactcgctgcccaaggacatgcacatcattagt
accaatgagaaccaagtgttcgcagctgtccaggaatggaaccagaatgacacgtacaac
ctctacatctcagacacacgtgggatctacttcaccctggccatggagaacatcaagagc
agcagaggtctgatgggaaacatcattattgaattgtatgaggtagcaggtatcaaaggg
atattcctggcaaacaagaaggtggatgaccaagtgaagacatacatcacttacaacaag
ggcagggattggcgcctcctgcaagctccagacgtggacctgagaggaagcccagtacac
tgcctgctgcccttctgctccctacatctacacttgcagatctctgaaaatccgtattcc
tcagggagaatctccagcaaggagacggctccagggctcgtggtggccacaggcaacatt
ggtccagagctctcatatactgatatcagcgtgttcatctcttccgatgggggcaacaca
tggagacagatctttgatgaagagtacaatgtctggttcctagactggggtggcgccctc
gtggccatgaaacacacacctctaccagtcaggcatttgtgggtgagttttgacgagggc
cactcctggaacaagtacggtttcacttcggttcctctttttgtggacggagctctggtg
gaggcaggcgtggagacccaaattatgacagtttttggccacttcagcctccactcggaa
tggcagttggtgaaggtggactacaaatctgtcttcagccggcgctgcagcaaggaggat
tatgagacctggcgcctgctcaatcagggggagccttgcatcatgggagaaaggaaaata
ttcaagaaacgcaagccaggagctcagtgtgccctgggccaagactcctcagggacggtg
gtctcagaaccctgtgtctgtgccgactgggactttgaatgtgactatggctatgagaga
cgtggagaaagccagtgtgtcccagctttctggtacaatccagcatccccgtcaaaggac
tgcagccttggtcaaagctaccttaacagcactgggtaccggcggatcgtgtccaacaac
tgcacagacggactgagggagaagtacaccgccaaggcccagatatgccccggaaaagcc
cctcacggcctccacgtggtgacgaccgatgggcgcctggtggcagagcaggggcacaat
gcgaccttcatcatcctcatggaggagggtgatctccaaaggacaaacatccagcttgac
tttggggatgggattgcagtgtcctatgctaacttcagtcccatcgaggaaggcatcaag
cacgtgtacaagagtgcggggatcttccaggtgacggcctatgcggagaacaacctgggc
tcagacacagctgtcctcttcctgcacgtggtttgtccggtggagcatgttcatctccga
gttccatttgttgccataagaaacaaggaggtcaacatcagtgccgttgtgtggcccagc
cagctggggaccctgacctatttctggtggttcggcaatagtacaaagcccctcatcacc
ttggacagcagcatttccttcacattcctagcagagggaaccaataccatcactgtccag
gtggctgctgggaatgccctcatccaggacacaaaagatatcgcagttcacgaatacttt
cagtcccaactcttatcattctctcctaatctggattaccacaatcctgacattccggag
tggaggcaagatattgccaatgtgatcaagcgggctctggtgaaagtaaccagcatccca
gaagagcagatcctagttgccgtgttccctggcctccccacttccgcagagctcttcatc
cttccccccaagaacttgacagagaggaggaaaggcaatgaaggcgacctggaacaaatt
gtagagacgctgtttaacgctctaaaccaaaatttagtccagtttgagctgaagccaggg
attcaagtaattgtgtacgtcacacagctgactttagctccactggtggactccagtgct
gggcacagcagctcagccatgcttatgctcttgtcagtggtgtttgtcggcctggctgtg
tttttgatctacaaatttaaaaggaaaatcccctggattaacatctatgctcaagtccaa
cacgacaaggagcaggagatgattgggtcagtgagccaaagtgaaaacgcccccaaaatc
acactcagtgacttcaccgagcccgaggaactgctggacaaagagctggacacccgggtc
ataggaggcattgccaccattgcaaacagcgaaagcacaaaggagatccccaactgcact
agtgtttaa
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