Phocoena phocoena (harbor porpoise): 136136319
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Entry
136136319 CDS
T11058
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136136319 (CDHR1)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Cadherin related
136136319 (CDHR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
136136319
NCBI-ProteinID:
XP_065750515
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Position
16:complement(50617657..50636953)
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AA seq
866 aa
AA seq
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MGRGLRAVLALGLLFLRLAQANFAPYFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGDPVSYHISFDPSARSVFSVDPNFGNITLIEELDREREDEIEAIVSISDGLNLVAEK
VTILVTDANDEAPRFIQEPYIVQVPEDTPAGSSIAKVRAVDRDTGSGGSVTYFLKNPHST
KFSVDRHSGVLRLQAGATLDYEKAPAHFIAVVAKDGGGRLRGASVVLSATTTVTVNVEDV
QDMAPVFVGTPYYGYVYQDTLPGSEVLTVVAMDGDRGKPNRVLYSLVNGSDGAFEINETS
GAISITQSPAQLRRAVYELHVQVAEVSSAGTPAAQAMAPVTIRIVDLNNHPPTFYGESGP
QNRFELSMYEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIVVENSATIDFEKFKVLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIA
RIPENAPGGSNVLAVTAVDPDTGPWGEVKYSIYGSGADLFLIHPSSGIIYTQPWASLDAE
DTARYNFYVKAEDMEGRYSLAEVFVTLLDVNDHYPQFGKRVQEKTMVLGTPVKIEAIDQD
AEEPNNLVDYSITHAEPANVFDIDTHTGEIRLKNSIRSLDALHNITPSGDHTWSLEVQAK
DRGSPSFSTTALLKIDIIDTEMLSRNPMAAFLMQTKDNPMKAVGVLAGIMAIIVAITVLI
STATFWRNKKSNKVLPVRRVLRKRPSPAPRTAGIKWLKFRRTKAADKFVLREDPPNENCN
NNSLGSAPPPKVPAPPPPPSVAPSMGPAHWMVPTVSGSLAPQQPHPSPKPKALAKHKAAG
RPVQSALVSELRQKFEKKNVHSEAYF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcctgcgggccgtcctggccctggggctgctgttcctccgcctggcccag
gccaacttcgccccctactttttcgacaacggggtgggcagcaccaacggaaacatggcc
ctcttcagcctcccggaggacactcctgtgggctctcatgtgtacaccctgaatggaaca
gaccccgagggagaccccgtctcctaccacatcagctttgaccccagcgctagaagtgtc
ttttcggttgaccccaattttggaaacataaccctgattgaagagctggacagagagagg
gaggacgagattgaagctattgtcagcatttctgacggcctgaatctggtggcggaaaaa
gtcactatcctggtgactgatgccaatgacgaggcacccaggttcatccaggagccctac
attgtccaggttcccgaggacacacctgccgggagcagtatcgccaaggtccgtgcagtg
gacagggacacaggttctggaggaagtgtcacctacttcctgaagaatccacactccacc
aagttttctgtggaccgccacagtggtgtactgcgcctccaggctggggccaccctggac
tacgagaaggccccggcccacttcattgctgtggttgccaaggatggcggagggaggctg
cgaggggccagcgtggtgctctcggccaccaccacggttacagtcaatgtggaggacgtg
caggacatggcccctgtcttcgtgggcacgccctactacggctatgtgtaccaggacacc
cttccgggctcagaggtcctgaccgtcgtcgccatggatggagatcgcggcaaacccaac
cgtgttctctacagcctcgtgaacggcagtgatggagcctttgaaattaatgagacgtct
ggagcaatctccatcacccagagccctgcccagctccggagagcggtgtatgagctgcat
gtacaggtggctgaggtcagctctgcagggaccccagctgcccaggccatggcccctgtc
accatccggatcgtggacctcaacaaccatccaccgacattctatggagagagtggaccc
cagaacagatttgagctgtccatgtatgagcacccgccccagggggagatcctgcggggc
ctcaagatcactgtcaatgactcagaccagggagccaatgccaaattcaacctgcggctg
gtgggacccgggggcatcttccgagtggtcccccagacggtcctgaatgaagcccaagtg
acgatcgttgtagagaactcagccaccattgactttgaaaagttcaaagtgttaaccttc
aagctcctggccatcgaagtgaacaccccagagaagttcagctccacagcggacatcgtg
atccagctcctggacaccaatgacaatgtccccaagttcacctcccactactacattgcc
aggatccccgagaatgccccagggggctccaacgtgttggctgtcacagccgtcgatcca
gacacaggtccctggggtgaagtcaaatactccatctatggatccggggcagacctcttc
ctgatccacccatcctctgggatcatctacacccagccctgggccagcctggacgccgag
gacactgccaggtacaacttctacgtgaaggcagaggacatggagggcaggtacagccta
gccgaggtgttcgtcacgctgctggatgtcaatgaccactacccccagtttggaaagcgc
gtccaggagaagacaatggtgctggggaccccagtcaaaattgaggccatagaccaggac
gcagaggagcccaacaacctggtggactattccatcacccacgcagagccagccaacgtg
ttcgacatcgatacacacacgggggagatccggctcaagaactccatccgctccctggat
gccctgcacaacatcacacccagcggggaccacacgtggtcactagaggtgcaggccaag
gaccgcggctccccatccttcagcaccacggccttactcaagattgacatcatagacact
gagatgctgtcccgaaaccccatggctgccttcctgatgcagaccaaagacaaccccatg
aaggccgtgggtgtgctggccggcatcatggccattattgtggccataaccgtcctcatc
tccaccgccaccttctggcgcaacaagaagtccaacaaggtcctgccggtgcggcgtgtg
ctccgcaagcggcccagccctgcaccccgcaccgccggcatcaagtggctcaagttcaga
aggaccaaggccgctgacaagtttgtgctcagagaggatcctcccaatgagaactgcaac
aacaacagcctgggaagtgcaccgccccccaaagtccccgctccccctccaccacccagc
gtggcacccagcatgggaccagcccattggatggtgcctacagtctctggctcactcgcc
cctcagcaaccccatccatcaccaaaacccaaggccttggcaaaacacaaggctgcggga
agacccgtccagtcagctctggtctctgagctcaggcaaaagtttgagaagaagaatgtg
catagcgaggcttacttctag
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