Phocoena phocoena (harbor porpoise): 136136344
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Entry
136136344 CDS
T11058
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136136344 (BTAF1)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
136136344 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
TPR_Trm732_C
HEAT_2
Cnd1
ARM_ECM29
UTP20
Rac1
DUF3783
Motif
Other DBs
NCBI-GeneID:
136136344
NCBI-ProteinID:
XP_065750544
LinkDB
All DBs
Position
16:complement(34494457..34575406)
Genome browser
AA seq
1771 aa
AA seq
DB search
MPRTKQETTSEGAMEDSSTTDRLNFDRFDICRLLQHGASLLGSAGAEFEVQDEKSGEVDP
KERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSAALVNKQPTLQAAELIDS
EFRTGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGEPEEKRRKIANVVINQSA
NDSKVLIDNIPDSSPLIEETNEWPLESFCEELCNDLFNPSWEVRHGAGTGLREILKAHGK
SGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVV
LKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQDVINTLLPKVLTRIIEG
LQDLDDDVRAVAAASLVPVVESLVYLQTQKVPFIINTLWDALLELDDLTASTNSIMTLLS
SLLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETLFTLLSTQDQNSSSWLIP
ILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVAAACPWMGAWLCLMMQPS
HLPIDLNMLLEVKARAKEKTGGKVRQGQSQSKEVLQEYIAGADTIMEDPATRDFVVMRAR
MMAAKLLGALCCCICDPGVNVVTQEIKPAESLGQLLLFHLNSKSALQRISVALVICEWAA
LQKECRAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQLISSLADAHIEVGNRVNN
NVFTIDQANDLVTAVFNEVTSSFDLNLQVLQQLDSKRQQVQMTVTETNQEWQVLQLRVHT
FAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCIAKLLQQCTRRTPCPNSK
IIKNLCSSLCVDPYLTPSVTCPVPTQSGQENSKGSNSEKDGMHHTVTKHRGIITLYRHQK
AAFAITSRRGPTPKAVKAQIADLPAGGSGNILVELDEAQKPYLVQRRGAEFALTTIVKHF
GGEMTVKLPHLWDAMVGPLRNTIDINNFDGKSLLEKGDGPAQELVNSLQVFETAAVSMDS
ELHPLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIGTMETMNIFLEKVLPWLGAIDD
NIKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMP
LEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPVPINAELRKYQQDGVNWLA
FLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAECMPLPSLVVCPPTLT
GHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVASYDVVRNDIDFFRNIKF
NYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWSLFDFLMPGFLGTE
RQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQDLPPKIIQ
DYYCTLSTLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYLRKL
CNHPALVLTPQHPEFKNTTEKLTVQNSSLHDIQHAPKLSALKQLLLDCGLGNGSTSESGT
ESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPS
IDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRG
TLEEKIMGLQKFKMNIANTVISQENSSLQTMGTDQLLDLFTLDKDGKAEKADTSTSGKAS
MKSVLENLSDLWDQEQYDSEYSLENFMHSLK
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaccaaacaagaaactacttcagaaggtgctatggaagattcatctactaca
gatcgattgaattttgacagatttgatatatgtagattattacaacatggggcatcactt
ttgggatctgctggtgcagaatttgaagtacaagatgaaaaatcaggtgaagtggatcct
aaagagaggatagcacgccaacgaaaactattacagaagaaacttggccttaatatggga
gaagctattggaatgagcactgaagaactctttaatgatgaagatttggattatacccca
acttcagcagcccttgtaaacaaacaacctactctccaggcagctgaattgattgactca
gagtttcgaacaggaatgagcaatagacaaaagaacaaagctaaaagaatggccaagtta
tttgcaaaacagagatccagggatgcagtggaaactaatgagaagagcaatgatagcact
gatggggaaccagaagaaaagagacgaaaaatagccaatgttgttattaatcagtctgca
aatgattccaaagtcctgattgataatattccagacagttctcccttaattgaagagaca
aatgaatggcctttggaaagcttttgcgaagaactttgcaatgacctttttaatccctcc
tgggaggttcgacatggtgcaggcactggacttagggaaatccttaaagctcatgggaaa
agtggtggtaaaatgggagacagcactttagaagagatgattcaacagcatcaagagtgg
ttggaagacttggttattagactcctttgtgtgtttgcattagacagatttggagacttt
gtttctgatgaagttgtggcaccagttcgtgaaacttgtgctcagacattaggtgtggtg
ttaaaacacatgaatgaaacaggagttcataagactgtggacgtgctgcttaaattactt
acacaagaacaatgggaagttagacatggtggtctgctaggaataaaatatgctttggca
gttcgtcaggatgtaattaatactttattgcctaaagttttaactagaataattgaagga
ctccaggatcttgatgatgatgtgagagctgttgctgcagcatcattagtacctgtggta
gaaagccttgtgtatcttcagacacaaaaagtacccttcattataaatacattatgggat
gctcttctggaactagatgatctaacagcttcaacaaatagtattatgactcttctttca
tccttgttaacttatcctcaggttcaacaatgcagtattcaacagtcactcacagtttta
gttccacgagtctggccttttttgcatcacactatatcatcagttcgaagagcagcattg
gaaactctgttcactttattatcaactcaagaccagaactcttcatcttggcttatacct
atccttcctgatatgcttcgacacatttttcagttttgtgttttagaaagcagccaggaa
attctggacctcattcacaaggtttggatggaattgttgagcaaggcttcagttcagtat
gtggtagcagctgcttgtccatggatgggtgcttggctttgcttaatgatgcagccttct
catttacctattgatttaaatatgctgcttgaagtaaaagctagagccaaggaaaaaaca
ggtggtaaggtgcgtcaaggccaaagccagagtaaagaagtacttcaggagtacattgca
ggtgcagacaccatcatggaagaccctgccaccagggattttgttgttatgcgggctaga
atgatggcagccaagttgttaggagcactttgttgttgtatctgtgatccaggtgtaaat
gtggtaacccaagaaattaaaccagctgaatcccttggccagttactactcttccatttg
aactccaaatctgccttacagagaattagtgtagctttggtaatctgtgaatgggctgct
ttacagaaggagtgtagagctgttaccctagctgtgcagccacgtttacttgatatcctt
tcagaacatttatattatgatgaaattgccgttccattcacacgaatgcagaatgagtgt
aaacagcttatttcatcattagctgatgcacatattgaagttggtaatagagtaaacaac
aatgtttttacaattgatcaagctaatgacctggtcactgctgtttttaatgaagtcaca
tcatctttcgatttaaatcttcaagtgttacagcagttagatagtaaacgacagcaggtc
caaatgaccgttacagagaccaaccaggagtggcaggtgttgcagttgagagtgcatact
tttgctgcatgtgcagttgtaagcttgcagcaacttccggagaaattaaatcctattata
aaaccattaatggagacaattaaaaaagaagagaatactctagtgcagaactacgcggct
cagtgcatagccaaactgcttcagcagtgcacaagaaggacgccctgtcccaattcaaaa
attattaaaaatctctgtagctcactttgtgtggacccatatctaactccttctgtcacg
tgtccagtaccaacacaaagtggccaggaaaattctaaaggatccaactctgaaaaagat
ggaatgcatcatactgtcaccaagcacaggggtataattacactctataggcatcaaaaa
gctgcttttgctatcacaagtaggcgaggtcctacccccaaagcagtaaaagctcaaata
gcagatcttcctgcaggaggtagtggaaatatccttgttgaacttgatgaggcccagaag
ccttacctggtacaacggagaggagctgaatttgccttgacaactatagtgaagcatttt
ggtggtgaaatgacagtgaagttaccacatctctgggatgctatggttggtccattgagg
aatacaatcgacataaataattttgatggaaagtccctcctggaaaagggagatggccct
gcccaagaactggtgaattctctgcaagtttttgaaacagcagcagtgtcaatggattct
gagcttcatcccttgttggtacagcatttgcctcatctttatatgtgccttcagtacccc
agcactgcagtgaggcacatggctgctcgttgtataggcgtcatgagcaaaataggtacc
atggaaacaatgaatatttttttggagaaggttcttccatggctgggagcaattgatgac
aatatcaaacaagagggtgcaattgaagcacttgcctgtgtaatggaacaactggatgtt
ggtattgttccatatattgtccttttagtcgtgcctgtgttgggaagaatgagtgatcag
acggacagtgtaagattcatggctacacagtgctttgcaacactaattagactcatgcca
cttgaggcaggcattccagaccctccaaatatgtcagaagaattaatccagttgaaagcc
aaggaacgacactttttggagcaattgttagatgggaaaaaattagaaaattacaagatt
ccagtaccaatcaatgctgaactcagaaaatatcagcaggatggtgtgaactggttagca
tttcttaataagtataagcttcatggaattctgtgtgatgacatgggtttaggaaaaact
ttacagtccatctgcattctagcaggagatcattgtcacagggcccaggaatatgcaaga
tcaaaattggcagaatgtatgccacttccttccttggtggtttgtccgccaacattaaca
ggtcattgggtggatgaagtaggtaaattttgctccagagaatatctcaatccattgcat
tatactggacctcccactgaaagaataaggttacagcatcaggtgaaaaggcacaatctg
atagtggcttcatatgatgttgtgagaaacgacatagatttctttagaaatattaaattt
aactactgtattcttgatgaaggccatgtcatcaaaaatggaaaaacaaaattgtcaaaa
gcagtaaaacaactgactgctaattataggattattctttctggaacaccaatccagaac
aacgttttggagctgtggtcattatttgatttcctcatgcccggatttttggggactgaa
cgccagtttgctgcacgatatggtaaacctatattagcaagtagggatgctcgaagctcc
agtcgtgaacaagaagcaggtgttctcgcgatggatgcactgcaccgccaagtcctgcca
tttcttttgagaagaatgaaagaagatgttttgcaggatctaccgcccaaaattattcaa
gactattactgtactcttagtactctccaggttcagctctatgaggattttgctaagtct
cgtgccaagtgtgatgttgatgaaacagtttcttcagctgcactttctgaagaaactgaa
aaaccaaagcttaaagctacaggccatgtattccaggcattacagtacctgcgtaaactg
tgcaaccatccagcattagtcttaacacctcaacacccagagttcaagaatactactgag
aaactcacggttcagaattcttctctccatgatattcaacatgcccctaaactctcggct
ttgaaacaattgctgttggactgtggtttgggaaatggcagcacttccgagagtggcaca
gagtctgttgtagcccagcacaggatactgatcttctgtcagcttaaaagcatgcttgat
atagtagagcacgatcttctcaagcctcacttaccctctgtcacttacttgagattagat
ggtagcatacctcctggtcagaggcattccattgtttcacggtttaacaacgatccatcc
atagatgttctcttacttacaactcacgttggtggcctggggcttaacttaacaggcgct
gacacagtggtatttgtggagcatgactggaatcccatgcgtgatctacaagccatggac
cgggcccatcgcattgggcagaaacgtgtggttaacgtgtaccgattgataaccagagga
acgttggaagagaaaataatgggtctgcagaagttcaagatgaacatagcaaatactgtt
attagccaagagaattccagtttgcagactatggggacagatcagctccttgatctgttt
actcttgataaggacggcaaagcagaaaaagctgacacctctacttctggaaaagcaagt
atgaaatcagttcttgaaaacctgagcgatctgtgggatcaagagcaatacgattcagag
tacagcctggaaaatttcatgcattctctcaaataa
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integrated database retrieval system
