Phocoena phocoena (harbor porpoise): 136136396
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Entry
136136396 CDS
T11058
Symbol
LBX1
Name
(RefSeq) transcription factor LBX1
KO
K09353
homeobox protein LBX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136136396 (LBX1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
136136396 (LBX1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Motif
Other DBs
NCBI-GeneID:
136136396
NCBI-ProteinID:
XP_065750628
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Position
16:27193716..27195750
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AA seq
281 aa
AA seq
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MTSKEDSKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLL
AAADKHAPGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQ
TPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKL
KRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEAAGGGGSGCGRAKSRPGSPALPPG
APQAPGAGPLQLSPASPLTDQPASSQDCSEDEEDEEIDVDD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaaggaggacagcaaggcggcgccgggggaggagaggcggcgcagcccgctg
gaccacctgccgcctcccgccaactccaacaaaccgctgacgccgttcagcatcgaggac
atcctcaacaagccgtctgtgcggagaagttactcgctgtgcggggcggcgcacctgctg
gcggccgcggacaagcacgctccgggcggcttgcccctggcgggccgcgcgctgctctcg
cagacctcgccgctgtgcgcgctggaggaactcgccagcaagacttttaaggggctggag
gtcagcgtcctgcaggcagccgaaggccgcgacgggatgaccatctttgggcagcggcag
acccccaagaagcggcgaaagtcgcgcacggccttcaccaaccaccagatttacgagttg
gagaagcgcttcctctaccagaagtacctgtcccccgccgatcgcgaccaaattgcgcag
cagctgggcctcaccaatgctcaggtcatcacctggttccagaatcggcgtgccaagctc
aaacgggacctggaggagatgaaggccgacgtggagtccgccaagaaactgggccccagc
gggcagatggacatcgtggcgctggccgaactcgagcagaactcggaggctgcgggcggc
ggcggcagcggctgcggcagggctaagtcaaggcctggctctccggcactccccccaggc
gccccgcaggccccgggcgccgggcccctgcagctctcgcccgcctccccgctcacggac
cagccggccagcagccaggactgctcggaggacgaggaagacgaagagatcgacgtggac
gattga
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