Phocoena phocoena (harbor porpoise): 136136648
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Entry
136136648 CDS
T11058
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136136648 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136136648 (TAF5L)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136136648 (TAF5L)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136136648 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
136136648 (TAF5L)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136136648 (TAF5L)
STAGA complex
136136648 (TAF5L)
TFTC complex
136136648 (TAF5L)
SAGA complex
136136648 (TAF5L)
SLIK complex
136136648 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
RMC1_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD40_like
eIF2A
Nbas_N
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
WD_LRWD1
vATP-synt_AC39
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
136136648
NCBI-ProteinID:
XP_065750946
LinkDB
All DBs
Position
16:82478110..82500318
Genome browser
AA seq
591 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSAEEMATSLAVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSESQHSHEVMPLLYPLFVYLHLNLVQSSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQ
SDNNTALCRVLTWHIHLDVQPAKRTDYQLYASGGPSRGGGEGGGLEPADVPAPILQNEAA
LEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCVKLWSLR
SKKLKSEPHQVDVSRIHLACDILEKEDDEDDNAGTEMKVLRGHCGPVYSTRFLADSSGLL
SCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTHP
LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSP
NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRIWD
IRSAHCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtgcgcaccgagcagattcagatggccgtgtcctgctacctcaaacgccgg
cagtacggggacgcggatggcccactgaagcaaggcctgcggctgtcgcagagcgccgag
gagatggccaccagcctcgcagtccaatcagaatctggttgtgccaacatagtgtctgcg
gccccttgccaggcagagccccagcaatatgaagtgcagttcggacggctgcggaatttc
ctcaccgattctgaatcccagcacagccatgaagtgatgcctctcctctaccccctcttt
gtctacctccacctcaacctggtccagagcagtcccaagagcacggtggaaagcttttac
agccgcttccacggaatgtttctgcagaatgccagccagaaggacgtcatcgagcagctg
cagaccacccagaccatccaggacatcctgtctaacttccggctgcgggccttcctggac
aacaagtacgtggtccgcctgcaggaagacagctacaactaccttctccgctacctccag
agtgacaataacaccgccctgtgcagagtcctcacctggcacatccacctggacgtgcag
cccgccaagaggacggactaccagctctacgccagtggcggcccctcccggggcgggggc
gagggcggcggcctggagcctgccgatgtgcccgcgcccatcctgcagaacgaggctgcg
ctggaggtcctgcaggagagcattaagcgtgtcaaggacggccccccctctctcaccacc
atctgcttctacgccttctacaacacggagcagctgctgaacacggcggaggtctccccg
gacagcaagctgctcgccgctggctttgacaactcctgtgtaaaactgtggagtctgcgc
tccaagaagttaaaatcggaaccgcatcaagtagacgtgtcccgcatccacttggcttgt
gatatcttggagaaggaggacgacgaggacgataacgcaggcacggagatgaaggtcctg
cggggacactgcgggccagtgtacagcaccaggttccttgcggacagctcagggctgctc
tcctgctctgaggacatgtccatcaggtactgggacctcggcagcttcaccaacaccgtg
ctgtaccagggccacgcctaccccgtgtgggacctggacatcagccctcacagcctgtac
ttcgccagtgggtcccacgaccgcacggccaggctgtggtcatttgatcggacgcaccct
ctacgcatctacgccgggcacctggcagacgtggactgcgtcaagttccaccccaattca
aactacttagccacgggctcgaccgacaagacggtccggctgtggagcacccagcagggg
aactcggtgaggctcttcacgggccaccgcggccccgtgctctctctggccttttccccc
aacggtaagtacttggcgtcggcgggcgaggaccagcggctgaagctgtgggacttggct
tccgggaccctctacaaagagcttcggggccacacggacaacatcaccagcctcaccttc
agcccagacagcagcctggtcgcgtcggcgtccatggacaattcggtgcgcatctgggac
atcaggagcgcgcactgcagcgcacccgctgacggctcgtccagcgagctcgtgggcgtc
tacaccggccagatgagcaacgtgctgagcgtgcagttcatggcctgcaacctcctgctg
gtgaccggaatcacacaagaaaatcaggaacattga
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integrated database retrieval system
