Phocoena phocoena (harbor porpoise): 136136715
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Entry
136136715 CDS
T11058
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136136715 (MMS19)
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136136715 (MMS19)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136136715 (MMS19)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
136136715 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TPR_CAND1
HEAT_MROH2B_C
HEAT_GCN1
TPR_DNAAF5
HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
136136715
NCBI-ProteinID:
XP_065751052
LinkDB
All DBs
Position
16:30247295..30279125
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AA seq
1029 aa
AA seq
DB search
MAAAAALEAVAPTGALWGLVQDFVMGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEAEGLAALNSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLQQKWSYEDKDERPLSGFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPDLLSSG
DLELAVGHLYRLSFLEEDSQSWVAALEASGTLATLYPVAFSSHLVPKLAGELCIEESDLA
RGYGPTKCSRHRRCLQALSAISTHASIVKETLPLLLQHLRQMNKGNTVAGTSEVIAVCQS
LQQVAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKEHSVLKKVLLQDEVLAAMVSVI
GTATTHLSPDLAAQSVAHIVPLFLDGNITFLPENSFPGRFQPFQDGSSGQRRLVALLMAF
VCSLPRNVEIPQLNQLMRELLELSCCHNCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLA
VDKVEAGLSSGPYRSQAFTLLLWVTKALVLRYHPLSSCLTDRLMGLLSDPELGPAAADGF
CLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVRGFHAAPRDVKPNYLKGLSHVLNR
LPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLN
LSSSPSMAVRIAALQCMHAVTHLPTPVLLPYKLQVIRALAKPLDDKKRLVRKEAVSARGE
WFLLGSPGS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctctggaggcggtggcgcctacgggcgccctgtggggcctcgtg
caagacttcgtcatgggtcagcaggagggccccgctgaccaagtggctgcagatgtgaaa
tctggaagctatacggtgttacaagtggtggaagcccttgggtcctctctagagaatcca
gaaccccgaactcgggcacgaggaatccagctcttgtcacaggtgctactgcagtgtcac
tccttgctcctggagaaggaagtggtacacttgatcctattctatgagaaccggctgaag
gaccatcatcttgtgatcccatctgtcctgcagggtttgagggcacttagcctgtgtgtg
gccctgcccccagggctggctgtctccgtgcttaaagccatcttccaggaggtccacgta
cagtccctgccacaggtggaccgacacacagtctacagtatcatcaccaacttcatgcga
acccgggaagaagagctgaagggcctaggagctgatttcacctttggcttcatccaggtg
atggatggggaaaaggatccccgtaatcttctggtggccttccgcatcgtccatgacctc
atctccagagactatagcctgggaccctttgtggaggagttgtttgaagtgacatcctgt
tacttccctattgattttactcctccacctaatgatccccatggtatccagagagaagat
ctcatcctgagtcttcgagctgtgctggcttctacaccgcgatttgctgagttcctgctc
cccctgctgattgagaaagtggattccgagattctgagtgccaagctggattctctgcag
actctgaatgcttgctgtgctgtgtacggacagaaagaactaaaggacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtagaggccgag
ggcctggcagcccttaactccctgactgcgtgtttgtctcgctctgtgctgagggctgat
gctgaggacctccttgactccttccttagcaacattctacaggactgcaggcaccatctg
tgtgaaccagacatgaaactggtgtggcctagtgccaaactgttacaggcggctgcaggt
gcgtctgcccgggcctgtgaccacatcaccagcaacgtgctgcccctactgctggaacag
ttccacaagcacagtcagagcaaccagcggcggacaatccttgaaatgatcctgggtttc
ttgaagctgcaacagaaatggagctatgaagacaaggatgaaaggcctctgagtggcttc
aaggaccagctgtgctcactggtattcatggccctgacggaccccagcacccagcttcag
cttgttggcatccgtacactcacagtcttgggtgcccagccagatctcctgtcttctggg
gacttggagctggcagtgggtcacctatacagactgagcttcctggaggaggattcccag
agttgggtggcagcactggaagcatcaggaaccctggccactctctaccctgtggccttc
agcagccacctagtgcccaagcttgctggggagctgtgtatagaggagtcagatttggct
agagggtatgggcccaccaaatgctcccggcatcggcgctgtctgcaggccttgtcagct
atatccacacatgccagtattgtcaaggagaccctgcctcttctgctgcagcatctccgc
cagatgaacaaagggaatacggttgcaggaacaagtgaagttattgctgtctgtcagagt
ctccagcaggtggcagaaaaatgccagcaagaccccgagagctgctggtatttccatcag
acagctataccttgcctgcttgccttggctgtgcaggcttccatgccagagaaggagcac
tcagttctgaagaaagtgctgttgcaggatgaggtcttggccgccatggtgtctgtcatt
ggcactgccaccacccacttgagccctgacttggctgcccagagtgtcgcccacattgtg
ccccttttcttggatggcaacatcaccttcctgcctgaaaacagcttccctggcagattc
caaccattccaggatggctcctcagggcagaggcggctggttgcactgcttatggccttt
gtctgctccctgcctcgaaatgtggaaatccctcagctgaaccaactcatgcgggaactt
ttagagctgagctgctgccacaactgccccttctcctccactgctgctgccaagtgcttt
gcaggacttctgaacaagcatcctgcagggcaacagctggatgaattcctacagctggct
gtggacaaggtggaggctgggctgagctctgggccctatcgtagtcaggccttcacactg
cttctctgggtcacaaaggccctagtgctcagatatcatcctctcagctcctgccttaca
gaccggctcatgggcctcctgagtgatccagaactaggcccagcagcagctgatggcttc
tgtctgctcatgtctgactgcactgatgtgctgactcgtgctggccatgctgaagtgcgg
atcatgtttcgccagcggttcttcacggataacgtgcctgctttggtccggggcttccat
gctgctcctcgagatgtgaagccaaattacctgaagggtctgtctcatgtacttaacagg
ctgccaaagcctgtgctcttgccggagctgcccacgctgctctccttgctgctggaggcc
ctgtcctgcccagactctgtggtacagctctccaccctcagctgccttcagcctcttcta
ctggaagcaccccaagtaatgagtcttcacgttgacaccctcgtcaccaagttcctaaac
ctcagctccagcccttccatggctgtccggatcgctgcactgcagtgtatgcacgctgtt
actcacctgcccacccccgtgctgctgccgtacaaactgcaggtgatccgggccttagcc
aaacccctagatgacaagaagagactggtgcgtaaggaagcagtgtcagccaggggagaa
tggtttctgctggggagccctggcagctga
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