Phocoena phocoena (harbor porpoise): 136136932 Help Entry 136136932         CDS       T11058                                  Symbol COL22A1 Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04974   Protein digestion and absorption SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  136136932 NCBI-ProteinID:  XP_065751228 LinkDB All DBs Position 17:complement(76648159..76881684) Genome browser AA seq 1593 aa AA seqDB search MGSLHGSVVAHLLWMLLLWSGDSSCQAQRAGCKTVHYDLVFLLDASSSVGKENFEKVRQW VANLVDTFEVGLDRTRVGVVRYSDRPTTAFELGRFGSRAEVKAAARQLAYHGGHTHTGDA LRYVTRHSFAARAGGRPGDRAFKQVAILLTDGRSQDLVLPAADAAHRAGIRIFAVGVGEA LREELEEIASEPRAAHVFHVSDFDAIDKIWGKLRRRLCENVLCPSLRVEGDRFKHTNGET KEITGFDLMDLFSVKAILGERENGAQSSYVRMGAFPVVQRTEDVFPQGLPDEYAFVTTFR LRKMSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGPRVHDLF NRDWHKVALSIQAQNVSLYIDCALVQALPIEERENIDIQGKTVIGKRLYDSVPVDFDLQR IVIYCDSRHSELETCCDIPSGPCQVTVLTEPSPPPQPPPTSGSEQIGILKTINCSCPAGE KGERGFDGPVGLPGPKGDMGAAGPAGAPGPKGEKGDTGRGPFVHGEKGEKGSLGLPGPPG RDGSKGTQGEPGLPGEVGVRGPQGPPGLPGPPGPVGAPGLHGERGEKGARGEKGERGLDG FPGKHGDTGEQGRPGPPGVPGPHGEKGAMGPAGPPGVPGSVVQREGLKGEQGAPGPRGHQ GPPGPPGAPGLMGPGGKDGPPGSQGLRGKKGETGPPGIPGLPGQQGPPGPPGIPGPPGPG GPPGLPGEIGFPGKPGHPGQTGPPGKDALNGHPGLPGPKGALGDRGADGLPGQPGPRGEV GEQGPAGRPGEKGQAGLPGVRGEKGEQGEKGELGLPGPKGDRGAKGETGPAGPPGLPGTT SLFTPHPGMPGEQGPKGEKGNPGAPGEAGSQGHPGELGPRGPIGPPGAKGQEGAQGPPGA AGNPGAPGPVGPPGSSGPPGSVGPPGTRGPPGKDGERGEKGAMGEEGSPGPGGPRGDPGA PGLPGPPGRGKDGEPGLRGPPGSPGPLGTKGDRGAPGIPGSPGNHGDPGIGVTGPPGPSG PPGEKGPQGSRGPPGFPGPQGPAGQDGVPGNPGERGPPGKPGPSPLLSPGDINLLVKDVC NDCPPGPPGLPGLPGFKGDKGLPGKPGREGTGGKKGDAGPRGLPGPPGTDGPQGNKGERG ADGEIGQKGDQGYPGVPGFMGPPGNPGPPGTDGIAGAAGPPGIQGSPGKEGPPGPQGPSG LPGIPGEEGKEGRDGKPGPPGEPGKTGEPGLPGPEGARGPPGFKGHTGDSGHPGPRGEPG AMGPPGREGSPGKDGDIGPTGPQGPRGLRGLPGKNGSPGSPGDHGTPGNPGQKGTRGENG SPGLPGFLGPRGPQGEPGEKGVPGKEGTPGKPGEPGPRGERGDPGIKGDKGPPGGKGQPG DPGIPGHKGHTGLMGPQGLPGENGPAGPPGPPGQPGFPGLRGESPSMDVLRRLIREEVEK QLETRLAYLLAQMPSAHTKASQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP IGPKGERGARGDPGEPGVGLRGEVGPAGIPGQPGEPGYAKDGLPGGPGPQGETGPAGHPG PPGPPGPPGQCDPSQCAYFASLAAARPSNVKGP NT seq 4782 nt NT seq  +upstreamnt  +downstreamnt atgggcagcctgcacgggagcgtcgtggcccatctcctctggatgctgctgctctggagt ggggacagcagctgtcaggcccagagggcaggttgcaaaaccgtccactacgacctggtc ttcctcctggacgcctcctcgagcgtgggcaaggagaacttcgagaaggtccggcagtgg gtggccaacctggtggacacgttcgaggtgggcctggaccgcacccgcgtgggcgtcgtg cgctacagcgaccggccgaccacggccttcgagctgggccgcttcggctcacgggccgag gtcaaggcggcggcgcggcagctggcctaccacggcggccacacgcacacgggcgacgcg ctgcgctacgtcacgcggcacagcttcgccgcgcgggccggcggccgccccggggaccgc gccttcaagcaggtggccatcctgctgaccgacggtcgcagccaggacctggtgctgccc gccgccgatgccgcgcaccgcgcaggcatccgcatcttcgccgtgggcgtgggcgaggcg ctgcgggaggagctggaggagatcgcctccgagcccagggccgcgcacgtcttccacgtg tcggacttcgacgccatcgacaagatctggggcaagctgcggcgccgcctgtgcgagaac gtgctctgccccagccttcgtgtagagggagatcgctttaagcacaccaatggcgaaacc aaggaaatcacaggttttgacctgatggatttgttcagtgtgaaggcgatcttgggggag agagagaacggggcgcagagttcctacgtccggatgggagccttccctgtggtgcaaagg actgaggatgtgttcccgcaaggcttgcctgacgagtacgcctttgtcaccaccttccgg ctccggaagatgtctcggaaagaagactggtatatctggcaggtcatcgaccagtacggc atcccgcaggtgtccatccggctggacggcgagaacaaggccgtggagtacaacgccgtg ggtgccatgaaggacgccgtcagggtggtcttccgaggtccccgggtccatgaccttttc aaccgggactggcacaaggtggccctgagcatccaggcccagaacgtctccctgtacata gactgtgcgctggtgcaggcactgcccatcgaggagagggagaacatcgacatccagggg aagaccgtgatcggcaagcgcctctatgacagcgtgcccgtcgactttgacctacagcgg atcgtgatttactgtgactcccgacactcagaactggagacgtgctgtgacatcccctcg ggtccgtgccaggtgaccgtgctgacggagccctcacccccgccccagccgcctcccacc tccggcagtgaacagatcggcattttgaagactatcaactgctcctgcccagctggagaa aagggtgaaaggggctttgatggcccagtgggactccccggcccaaagggggacatggga gccgctgggccggctggagctcctggacccaagggagagaaaggagatacgggcagagga ccttttgtccacggagaaaagggtgaaaagggttccctgggcctgccgggtccccctggg agagacggcagcaaaggcacgcagggggagccggggctgcctggggaggtgggcgtgcgg ggaccccaaggacctcctggacttcccggacctcccggccccgtcggagctcctggtctc catggagaacgaggtgaaaagggagcccgaggtgaaaagggggagagaggcctggatgga ttccccgggaagcacggggacactggagagcagggaagacccggccctcctggcgtgcca gggccccatggagaaaagggcgccatggggcctgcaggacctcctggggtaccgggctca gtggtgcagagagagggcctgaagggcgagcagggagccccgggaccacgaggtcaccag ggccctcctggaccaccaggcgctccgggtctgatgggtccaggaggcaaggatggacct cctggttcgcaaggtctccgaggaaagaaaggtgagaccggccctcctggaatccctgga ttgccggggcagcagggccccccaggaccacctggcatcccaggcccccctggacctgga ggccccccgggtttgcctggagagatcggcttcccaggaaaacctgggcaccctgggcag acgggacctcctggaaaggatgcgctgaacggacacccaggcctgccaggaccaaaggga gccctgggagacagaggggcagacggtttgcccggacagcctggcccgcggggtgaagtt ggggagcagggcccggcaggccgacctggagagaagggacaggcagggctcccaggcgtg aggggagagaaaggagaacagggagagaaaggggaactgggactcccgggaccgaaaggt gaccgaggtgcaaagggtgaaacgggtccagcaggccccccgggattacctggaactacg tccctgttcacgccgcacccagggatgccaggagaacaagggcccaaaggagagaagggc aatcccggcgcgcctggggaagcgggatcacagggtcatcctggagaactggggcctcgg ggacccattggaccaccgggcgccaagggacaggaaggcgcgcaggggccgcccggagca gctgggaaccccggcgctcctggacctgtaggtccccctggttccagtggccccccagga agtgtgggccccccgggcaccagaggcccccctgggaaagatggggagcgcggcgagaag ggagcaatgggagaagaaggaagcccagggccaggtggccccaggggcgatcctggtgcc cctgggctcccagggccacccggaagagggaaagatggagaaccgggacttcgtggacca cctggatcacctggacctctaggaactaagggggaccgtggtgcacctgggatccccggc tctcctggcaaccacggagacccgggcattggggtcactggccctcctggcccctctgga ccaccaggagaaaaaggacctcagggatctcgaggcccacctggatttcccggtccccag ggaccagctggccaagacggtgtacctggaaatccaggagaaagagggcctcctggcaaa ccgggcccctctccactactgtctccaggggacataaatctcttggttaaggatgtgtgc aatgactgtcccccaggtcccccaggcctccctggtctgccaggttttaaaggggacaaa ggtctcccaggaaagccagggagagaaggcacaggagggaaaaagggagatgctgggccc agaggcctcccagggcccccaggaacagatggaccacagggaaataaaggagaacgtggt gcagatggtgagattggacagaaaggtgatcagggttatccaggagttccaggtttcatg gggcccccagggaaccctgggccaccaggaacagatggaattgctggagctgcgggaccg ccaggaatccagggatccccaggaaaagaaggtcctcctggcccccaaggcccatctgga ttacccggaatcccaggagaagaaggcaaagaaggcagagatggaaaaccagggcccccc ggagagccgggcaaaacaggagagccaggtctgccaggaccggagggtgcccgcggtccc cctggcttcaagggacacaccggcgactctggccaccctggcccccggggagagcctggg gccatggggccccctggccgggaagggtcaccaggaaaagatggtgacattggacccaca ggaccacagggtccccgaggcctgaggggcttaccgggtaagaacggatcgcctggatct ccaggagaccatggcactccaggcaatcccggccagaagggaaccagaggagaaaacggc agcccagggctccctggcttcctgggtccccgtgggccgcagggtgagccgggagagaag ggagtcccaggcaaggaggggacccctgggaagccgggagagccgggacccagaggagaa aggggagatcctggcatcaaaggtgacaaaggacctcccggtgggaagggtcagcctgga gaccctgggatcccaggccacaaaggtcacacaggcctaatgggcccccagggactacct ggggagaatgggccggccgggccgccggggcccccgggccagccaggatttccaggactg aggggggagtctccatccatggacgtcctgcgacggctcatccgagaagaagtggagaag cagctggaaaccagactcgcctacctcctggcccagatgccctcagcgcacaccaaggcc tctcaaggcagacccgggcccccagggccccctggaaaagatgggcttccaggtcgggca ggccccatgggggagccaggacggcctgggcaagggggtctggagggaccctctgggccc ataggtcccaaaggtgagcgaggagccagaggtgacccaggtgaacctggagttggcctc cgaggcgaggtgggacccgccgggatcccaggtcaacccggggaacctggctatgctaaa gatgggctccccgggggtcccggtcctcaaggggagacaggaccagctggacaccctggc ccccccggaccccccggcccccctggccagtgtgacccctcccagtgtgcctacttcgcc agcctcgctgctgctcgacctagtaatgtgaagggcccctag

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