Phocoena phocoena (harbor porpoise): 136137010
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Entry
136137010 CDS
T11058
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04390
Hippo signaling pathway
pphc04530
Tight junction
pphc05165
Human papillomavirus infection
pphc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
136137010 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
136137010 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
136137010 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
136137010 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
136137010
NCBI-ProteinID:
XP_065751345
LinkDB
All DBs
Position
17:complement(80169990..80190738)
Genome browser
AA seq
1651 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLVLLTDLLLSQNWLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENL
LTALPRSLGKLSKLTNLNVDRNRLEALPPEIGGCMALSVLSLRDNRLAVLPPELAHTAEL
HVLDVAGNRLQSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQP
PLSLEDPGPRSSPSESWGDAPLGRVSVIQFLEAPAGDEDAEEAAAEKRGLQRRATPHPSE
LKVMKRGVERRSEATSCRPDSTQHSPSPPPSEEEKRLSTESGLSADSHLSASTASQGEPE
GLLAEEEETSQQESMPTSQEEVTEETYEEPTVRFAEDTLLLPREDGESEAGQLEAPWPVP
GERQRLIRKDTPHYKKHFKISKLPQPEAVVALLQGTQPDSEGPVGSGGWHNGPHVPWAPR
AEEEEEEEEEEEEEEAEEAAAAAAAAGAEEAGEEEESEGAVASAPSVKGVSFDQANNLLI
EPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAAQAGVRVG
DKLLEVNGVALQDAEHQQAVEALRGAGTTVHVRLWRERMVEPENAVTVTPLRPEDDYSPR
ERWGGGLRPRPRQPEPPGPLRQRRVACLVRSDKGLGFSIAGGKGSTPYRAGDPGIFISRI
AEGGAAHRAGTLQVGDRVLSIDGVDVTEARHDHAVSLLTAASPTIALLLEREAGGPLAPG
TPPHSPPPPAATTTTMATANPGEPGPLRLAPSLLAAALEGPYPVEEICLPRAGGPLGLSI
VGGSDHSSHPFGVQEPGVFISKVLPRGLAARSGLRVGDRILGVNGQDVRDATHQEAVSAL
LRPCLELVLLVRRDPPPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISK
VSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFDASAPE
VSPGIIANPFAAGIGRRNSLESISSIDRELSPEGPSKEKELPGQTPQWGPEAVVSGRSLE
SLKLDCRALAATPSTGSVQRVPSGASGGKMTEAPCSPGHQQPPSPPSPDELPANVKQAYR
TFAAVPGLHPPLEAPAQPPTPGPTASPEQLSFRERQKYFELEVRVPQTGGPPKRVSLVGA
DDLRKMQEEEARKLQQKRTQMLREAAGDAVDAGRPEGEAPEDEEPEEEPPWAGRGPAAGL
GPASPPPQGGGAPVRTAKAERRHQERLRVQSPELPAPERTLSPAERRALEAEKRALWRAA
RMKSLEQDALRAQMVLSKSQEGRSKRGPLERLAEAPSPAPTPSPTPLEDLGLQTGTSPGR
LALSGRKFDYRVFAALPSSRPVYDMQSPDFAEELRSLEPSPSPGLPEEDGEVAMVLLGRP
SPGAAGPEEVALCSSRRAMRPGRRGLGPVPS
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaatcggcacgtggagtcggtggacaagcgg
cactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgcagcctggaggag
ctgctcctcgacgccaaccagctgcgtgagctgcccaagcccttctttcggttgctgaac
ctgcgcaagctgggcctgagtgacaacgagatccagcggttgccccctgaggtggccaac
ttcatgcaactggtggagctggacgtgtctcggaatgacatccctgagatccccgagagc
atcaagttttgcaaagccctggagattgcagatttcagtgggaatcctttgtccaggctc
cccgaaggtttcacccagctgcgcagcctggctcatctggccctgaatgatgtgtctttg
caggcgctgcctggggatgtgggcaatcttgccaacctggtgaccttggagctccgggag
aatctgctcaagtccttgcctgcgtccttgtctttcctggtcaagctggaacagctggat
ctgggaggcaacgatctggaagtgctgccagacaccctgggggccctgcccaacttgcgt
gagctgtggctggaccggaaccagctgtcggccctgcccccggaactcgggaatctgcgg
cgcctggtgtgcctggatgtgtcggagaaccggctggaggagctgcctgcggagctcggg
gggctggtgctgctcaccgacctgctgctttcgcagaactggctgcagcggcttcctgac
ggcattggtcagctgaagcagctgtccatcttgaaggttgaccagaatcgtctctgcgag
gtgacggaggccattggggactgtgagaacttgtcagagctgatcctcactgagaacctg
ctgacggccctgccccgctccttggggaagctgagcaagctgaccaacctcaacgtggac
cggaaccgcctggaggcactgccgcctgagatcgggggctgcatggcactcagcgttctc
tctctgagggacaaccgcctggcggtcctgccgccggagctcgcccacacggccgagctg
catgtgctggatgtggccgggaaccgtctgcagagtctgccgttcgcactcacgcacctc
aacctaaaggccctgtggctggcggagaaccaggcgcagcccatgcttcggttccagact
gaggacgacgcccagaccggcgagaaggtgctcacctgctacctgctgccccagcagccc
ccgctcagcctcgaggacccggggccgaggagcagcccttcggagagctggggtgatgcc
ccgctcggccgcgtcagtgtcatccagttcctagaggcccccgcgggcgacgaggacgca
gaggaggctgctgccgagaaacggggcctgcagcgtcgggctacgcctcaccccagcgag
ctcaaggtgatgaagaggggtgtagagcgtcgaagcgaagccacctcctgcaggcccgac
tccacgcagcactcaccctcacccccgccctcggaggaggagaagaggctgagcaccgag
tctggcctgagtgcggactcgcacctgtctgccagcacagcctcccagggtgagcccgag
ggcctgctggcggaggaggaggagacgagccagcaggaatccatgccaacctcccaggag
gaggtcacagaggagacctatgaggagcccacggtgcgcttcgcggaggacacgctgctc
ctgcccagggaggatggcgagagcgaggcggggcagctggaggccccctggcccgtgccg
ggtgagaggcagcggctcatccgcaaggacacgccccactacaagaagcacttcaagatc
tccaagctgccccagcccgaggccgtggtggcgctgcttcaggggacacagccagacagt
gagggcccagtagggtccgggggctggcacaacggcccccatgtgccctgggctcctcga
gccgaggaggaggaggaggaggaggaggaggaggaagaggaggaagccgaggaggcggcg
gcggcagcggcggcggcgggagccgaggaggcgggcgaggaggaggagagcgagggggct
gtggcttctgcgccctctgtcaagggggtgtcgtttgaccaggccaataacctgctgata
gagcccgctcgcattgaggaggaagagctgacgctcaccatcgtgcggcagacggggggc
ctgggcatcagcatcgcgggcggcaagggctccacgccctacaagggtgacgacgagggt
atattcatctcccgggtatctgaggagggccctgcggctcaggctggggtccgagtaggc
gacaagctcctcgaggtgaacggcgtggccttgcaggacgccgagcatcaacaggccgtg
gaggcgctgcgtggcgcgggcaccaccgtgcacgtgcggctgtggcgggagcgtatggtg
gagcccgagaacgcggtcaccgtcacgcctctgaggcctgaggacgactacagcccccgg
gagcggtggggaggcggtctgcgcccgcgcccgcgccagcccgagccgccagggcccctc
cgccagcgtcgcgtggcctgcctcgtgcgcagcgacaagggcttgggtttcagcatcgct
ggggggaaaggctccacaccctaccgggctggagacccgggtatcttcatctcccgcatt
gctgaggggggcgccgcccaccgggcgggcaccctacaggtcggcgatcgcgtcctctcc
atcgacggggtggatgtgacggaggccaggcacgaccacgccgtctccctgctgaccgct
gcctctcccaccatcgccctgctgctggaacgggaggccggggggccgcttgcccctggt
actccgccacactcacccccaccccctgctgctaccaccaccaccatggccactgccaac
cctggggagcccggaccgctaaggctggcccccagtctgctggccgctgccctggagggg
ccgtacccagtggaggagatctgtctgccgagagctgggggccccttggggctcagcatc
gtcgggggctccgaccactccagccacccatttggcgtccaggagcccggcgtgttcatc
tctaaggtgctcccccggggcctggctgcacgcagtggcctgcgggttggggaccgcatc
ctgggagtgaatgggcaggatgtgcgggacgccacccaccaggaagcggtcagcgccctg
ctgcggccctgcctcgagctggtcctgctcgtgcggagggacccgccgcccccgggcatg
cgggagctctgtatccagaaggcccctggggagaagctgggcatcagcatccggggcggc
gccaagggccacgcagggaacccctgtgaccccacggacgagggcatcttcatctccaag
gtgagccccacaggagcggccgggcgagatggtcgcctgcgggtggggctgcggctgctg
gaggtgaaccagcagagcttgctgggcttgacgcacggcgaagccgtgcagctgctacgc
agcgtgggcgacaccctgactgtgcttgtctgtgacggcttcgacgccagcgcccccgag
gtgtccccaggcatcatcgccaacccctttgcagcaggcattggtcgccggaacagcctg
gagagcatctcctccatcgaccgggagctgagccccgagggccccagcaaggagaaggag
ctgcctggacagaccccacagtgggggccagaggccgtggtgagtggtcggagcctggag
agcctgaagctggactgccgcgccctggccgccacacccagcaccggcagtgtgcagagg
gtaccgtctggggcaagtggcgggaagatgactgaggccccctgttcccctggccaccag
cagcccccctccccgccctcccctgacgagctgcccgccaacgtgaagcaggcgtatagg
accttcgccgccgtgcccggcctgcacccgcccctggaggcccctgcccagcctcccacg
cctgggcccacggcctccccggagcagctgtccttccgcgagcggcagaagtacttcgag
ctggaggtgcgggtgccccagaccgggggcccccctaagcgcgtgtcgctggtgggcgcc
gacgacctgcggaagatgcaggaggaggaagcccgaaagctgcaacagaagaggacgcag
atgctgcgcgaggcggcgggggacgcggtggacgcggggcgcccggaaggcgaggccccg
gaggacgaggagcccgaggaggagccgccctgggccggccggggccccgccgcagggctt
ggccccgcgtcccccccgccgcagggaggcggcgctccggtgcggacggccaaggccgag
cggcgccaccaggagcggctgcgcgtgcagagcccggagctgccggctcctgagcggacc
ctgtccccggcggagcgccgcgccctggaggccgagaagcgcgcgctgtggagggcggcc
aggatgaagtctctggaacaggacgctctccgcgcacagatggtcctcagcaagtctcag
gagggtcgaagcaagcgggggcctctggagcgcctggccgaggccccctcgcccgcgccc
accccgtcacccacccccttggaagacctcggcctccagaccggcacctccccgggacgc
ttggccttgtctgggaggaagtttgactacagggtgtttgcagccctcccctcttccaga
cctgtctatgacatgcagtccccagactttgctgaggagctgaggtccttggaaccatct
ccgagccctggtctgccagaggaggatggagaggtggccatggtgcttctgggcaggcct
tcgccgggcgccgcgggccccgaggaggtggccctgtgcagcagccgccgcgccatgcgg
ccggggcgccggggcctgggcccggtgccctcctag
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